Identification of significant chromatin contacts from HiChIP data by FitHiChIP

HiChIP/PLAC-seq is increasingly becoming popular for profiling 3D chromatin contacts among regulatory elements and for annotating functions of genetic variants. Here we describe FitHiChIP, a computational method for loop calling from HiChIP/PLAC-seq data, which jointly models the non-uniform coverag...

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Detalles Bibliográficos
Autores principales: Bhattacharyya, Sourya, Chandra, Vivek, Vijayanand, Pandurangan, Ay, Ferhat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6748947/
https://www.ncbi.nlm.nih.gov/pubmed/31530818
http://dx.doi.org/10.1038/s41467-019-11950-y

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6748947/
https://www.ncbi.nlm.nih.gov/pubmed/31530818
http://dx.doi.org/10.1038/s41467-019-11950-y

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