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Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen
The prevalence of l-amino acids in biomolecules has been shown to have teleological importance in biomolecular structure and self-assembly. Recently, biophysical studies have demonstrated that natural l-amino acids can be replaced with non-natural achiral aza-amino acids in folded protein structures...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6761869/ https://www.ncbi.nlm.nih.gov/pubmed/31588264 http://dx.doi.org/10.1039/c9sc02211b |
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author | Kasznel, Alexander J. Harris, Trevor Porter, Nicholas J. Zhang, Yitao Chenoweth, David M. |
author_facet | Kasznel, Alexander J. Harris, Trevor Porter, Nicholas J. Zhang, Yitao Chenoweth, David M. |
author_sort | Kasznel, Alexander J. |
collection | PubMed |
description | The prevalence of l-amino acids in biomolecules has been shown to have teleological importance in biomolecular structure and self-assembly. Recently, biophysical studies have demonstrated that natural l-amino acids can be replaced with non-natural achiral aza-amino acids in folded protein structures such as triple helical collagen. However, the structural consequences of achiral aza-amino acid incorporation has not been elucidated in the context of any relevant folded biomolecule. Herein, we use X-ray crystallography to provide the first atomic resolution crystal structure of an achiral aza-amino acid residue embedded within a folded protein structure, definitively illustrating that achiral aza-proline has the capacity to effectively mimic the stereochemistry of natural amino acids within the context of triple helical collagen. We further corroborate this finding with density functional theory computational analysis showing that the natural l-amino acid stereochemistry for aza-proline is energetically favored when arranged in the aza-proline-hydroxyproline-glycine motif. In addition to providing fundamental insight into peptide and protein structure, the incorporation of achiral stereochemical mimics such as aza-amino acids could have far reaching impacts in areas ranging from synthetic materials to drug design. |
format | Online Article Text |
id | pubmed-6761869 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-67618692019-10-04 Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen Kasznel, Alexander J. Harris, Trevor Porter, Nicholas J. Zhang, Yitao Chenoweth, David M. Chem Sci Chemistry The prevalence of l-amino acids in biomolecules has been shown to have teleological importance in biomolecular structure and self-assembly. Recently, biophysical studies have demonstrated that natural l-amino acids can be replaced with non-natural achiral aza-amino acids in folded protein structures such as triple helical collagen. However, the structural consequences of achiral aza-amino acid incorporation has not been elucidated in the context of any relevant folded biomolecule. Herein, we use X-ray crystallography to provide the first atomic resolution crystal structure of an achiral aza-amino acid residue embedded within a folded protein structure, definitively illustrating that achiral aza-proline has the capacity to effectively mimic the stereochemistry of natural amino acids within the context of triple helical collagen. We further corroborate this finding with density functional theory computational analysis showing that the natural l-amino acid stereochemistry for aza-proline is energetically favored when arranged in the aza-proline-hydroxyproline-glycine motif. In addition to providing fundamental insight into peptide and protein structure, the incorporation of achiral stereochemical mimics such as aza-amino acids could have far reaching impacts in areas ranging from synthetic materials to drug design. Royal Society of Chemistry 2019-06-21 /pmc/articles/PMC6761869/ /pubmed/31588264 http://dx.doi.org/10.1039/c9sc02211b Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence (CC BY 3.0) |
spellingShingle | Chemistry Kasznel, Alexander J. Harris, Trevor Porter, Nicholas J. Zhang, Yitao Chenoweth, David M. Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen |
title | Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen
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title_full | Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen
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title_fullStr | Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen
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title_full_unstemmed | Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen
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title_short | Aza-proline effectively mimics l-proline stereochemistry in triple helical collagen
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title_sort | aza-proline effectively mimics l-proline stereochemistry in triple helical collagen |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6761869/ https://www.ncbi.nlm.nih.gov/pubmed/31588264 http://dx.doi.org/10.1039/c9sc02211b |
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