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An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity
TRiC/CCT assists the folding of ∼10% of cytosolic proteins through an ATP-driven conformational cycle and is essential in maintaining protein homeostasis. Here, we determined an ensemble of cryo-electron microscopy (cryo-EM) structures of yeast TRiC at various nucleotide concentrations, with 4 open-...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765261/ https://www.ncbi.nlm.nih.gov/pubmed/31492816 http://dx.doi.org/10.1073/pnas.1903976116 |
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author | Jin, Mingliang Han, Wenyu Liu, Caixuan Zang, Yunxiang Li, Jiawei Wang, Fangfang Wang, Yanxing Cong, Yao |
author_facet | Jin, Mingliang Han, Wenyu Liu, Caixuan Zang, Yunxiang Li, Jiawei Wang, Fangfang Wang, Yanxing Cong, Yao |
author_sort | Jin, Mingliang |
collection | PubMed |
description | TRiC/CCT assists the folding of ∼10% of cytosolic proteins through an ATP-driven conformational cycle and is essential in maintaining protein homeostasis. Here, we determined an ensemble of cryo-electron microscopy (cryo-EM) structures of yeast TRiC at various nucleotide concentrations, with 4 open-state maps resolved at near-atomic resolutions, and a closed-state map at atomic resolution, revealing an extra layer of an unforeseen N-terminal allosteric network. We found that, during TRiC ring closure, the CCT7 subunit moves first, responding to nucleotide binding; CCT4 is the last to bind ATP, serving as an ATP sensor; and CCT8 remains ADP-bound and is hardly involved in the ATPase-cycle in our experimental conditions; overall, yeast TRiC consumes nucleotide in a 2-ring positively coordinated manner. Our results depict a thorough picture of the TRiC conformational landscape and its allosteric transitions from the open to closed states in more structural detail and offer insights into TRiC subunit specificity in ATP consumption and ring closure, and potentially in substrate processing. |
format | Online Article Text |
id | pubmed-6765261 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-67652612019-10-02 An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity Jin, Mingliang Han, Wenyu Liu, Caixuan Zang, Yunxiang Li, Jiawei Wang, Fangfang Wang, Yanxing Cong, Yao Proc Natl Acad Sci U S A PNAS Plus TRiC/CCT assists the folding of ∼10% of cytosolic proteins through an ATP-driven conformational cycle and is essential in maintaining protein homeostasis. Here, we determined an ensemble of cryo-electron microscopy (cryo-EM) structures of yeast TRiC at various nucleotide concentrations, with 4 open-state maps resolved at near-atomic resolutions, and a closed-state map at atomic resolution, revealing an extra layer of an unforeseen N-terminal allosteric network. We found that, during TRiC ring closure, the CCT7 subunit moves first, responding to nucleotide binding; CCT4 is the last to bind ATP, serving as an ATP sensor; and CCT8 remains ADP-bound and is hardly involved in the ATPase-cycle in our experimental conditions; overall, yeast TRiC consumes nucleotide in a 2-ring positively coordinated manner. Our results depict a thorough picture of the TRiC conformational landscape and its allosteric transitions from the open to closed states in more structural detail and offer insights into TRiC subunit specificity in ATP consumption and ring closure, and potentially in substrate processing. National Academy of Sciences 2019-09-24 2019-09-06 /pmc/articles/PMC6765261/ /pubmed/31492816 http://dx.doi.org/10.1073/pnas.1903976116 Text en Copyright © 2019 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | PNAS Plus Jin, Mingliang Han, Wenyu Liu, Caixuan Zang, Yunxiang Li, Jiawei Wang, Fangfang Wang, Yanxing Cong, Yao An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity |
title | An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity |
title_full | An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity |
title_fullStr | An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity |
title_full_unstemmed | An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity |
title_short | An ensemble of cryo-EM structures of TRiC reveal its conformational landscape and subunit specificity |
title_sort | ensemble of cryo-em structures of tric reveal its conformational landscape and subunit specificity |
topic | PNAS Plus |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765261/ https://www.ncbi.nlm.nih.gov/pubmed/31492816 http://dx.doi.org/10.1073/pnas.1903976116 |
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