Cargando…

A Simple Method to Detect the Inhibition of Transcription Factor-DNA Binding Due to Protein–Protein Interactions In Vivo

Binding of transcription factors (TFs) to cis-regulatory elements (DNA) could modulate the expression of downstream genes, while interactions between TFs and other proteins might inhibit them binding to DNA. Nowadays, electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChI...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yang, Guangzhe, Chao, Dong, Ming, Zhenhua, Xia, Jixing
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2019
Materias:	Communication
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6770856/ https://www.ncbi.nlm.nih.gov/pubmed/31500097 http://dx.doi.org/10.3390/genes10090684

Ejemplares similares

A Simple Fluorescence Affinity Assay to Decipher Uranyl‐Binding to Native Proteins
por: Laporte, Fanny, et al.
Publicado: (2022)

Archaeoglobus Fulgidus DNA Polymerase D: A Zinc-Binding Protein Inhibited by Hypoxanthine and Uracil
por: Abellón-Ruiz, Javier, et al.
Publicado: (2016)

The Telomere Binding Protein Cdc13 and the Single-Stranded DNA Binding Protein RPA Protect Telomeric DNA from Resection by Exonucleases
por: Greetham, Matthew, et al.
Publicado: (2015)

Water-Mediated Recognition of Simple Alkyl Chains by Heart-Type Fatty-Acid-Binding Protein**
por: Matsuoka, Shigeru, et al.
Publicado: (2015)

Amino Acid Transporters in Plant Cells: A Brief Review
por: Yang, Guangzhe, et al.
Publicado: (2020)

Properties of INDETERMINATE DOMAIN Proteins from Physcomitrium patens: DNA-Binding, Interaction with GRAS Proteins, and Transcriptional Activity
por: Khan, Saiful Islam, et al.
Publicado: (2023)

Bioinformatic and Functional Analysis of a Key Determinant Underlying the Substrate Selectivity of the Al Transporter, Nrat1
por: Lu, Muxue, et al.
Publicado: (2018)

Virtual Screening of Soybean Protein Isolate-Binding Phytochemicals and Interaction Characterization
por: Liu, Panhang, et al.
Publicado: (2023)

Overexpression of OsMed16 Inhibits the Growth of Rice and Causes Spontaneous Cell Death
por: Jiang, Jie, et al.
Publicado: (2021)

Subtypes of associated protein–DNA (Transcription Factor-Transcription Factor Binding Site) patterns
por: Chan, Tak-Ming, et al.
Publicado: (2012)

Phase separation by ssDNA binding protein controlled via protein−protein and protein−DNA interactions
por: Harami, Gábor M., et al.
Publicado: (2020)

The Membrane Proximal Domain of TRPV1 and TRPV2 Channels Mediates Protein–Protein Interactions and Lipid Binding In Vitro
por: Doñate-Macián, Pau, et al.
Publicado: (2019)

STAT1:DNA sequence-dependent binding modulation by phosphorylation, protein:protein interactions and small-molecule inhibition
por: Bonham, Andrew J., et al.
Publicado: (2013)

Protein Domain Specific Covalent Inhibition of Human DNA Polymerase β
por: Yuhas, Shelby C., et al.
Publicado: (2021)

Disruption of an amino acid transporter LHT1 leads to growth inhibition and low yields in rice
por: Wang, Xiaohu, et al.
Publicado: (2019)

Cellular Id1 inhibits hepatitis B virus transcription by interacting with the novel covalently closed circular DNA-binding protein E2F4
por: Wei, Jie, et al.
Publicado: (2022)

An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana
por: Streitner, Corinna, et al.
Publicado: (2012)

The high-mobility-group domain of Sox proteins interacts with DNA-binding domains of many transcription factors
por: Wißmüller, Sandra, et al.
Publicado: (2006)

Detection and Characterization of Protein Interactions In Vivo by a Simple Live-Cell Imaging Method
por: Gallego, Oriol, et al.
Publicado: (2013)

A Simple Entropic‐Driving Separation Procedure of Low‐Size Silver Clusters, Through Interaction with DNA
por: Buceta, David, et al.
Publicado: (2021)

Overexpression of ABI5 Binding Proteins Suppresses Inhibition of Germination Due to Overaccumulation of DELLA Proteins
por: Finkelstein, Ruth R., et al.
Publicado: (2022)

Protein–DNA interactions: structural, thermodynamic and clustering patterns of conserved residues in DNA-binding proteins
por: Ahmad, Shandar, et al.
Publicado: (2008)

TherMos: Estimating protein–DNA binding energies from in vivo binding profiles
por: Sun, Wenjie, et al.
Publicado: (2013)

Mechanism of Interaction between Single-Stranded DNA Binding Protein and DNA
por: Kunzelmann, Simone, et al.
Publicado: (2009)

In Cellulo Protein-mRNA Interaction Assay to Determine the Action of G-Quadruplex-Binding Molecules
por: Prado Martins, Rodrigo, et al.
Publicado: (2018)

A Simple Approach to Design Proteins for the Sustainable Synthesis of Metal Nanoclusters
por: Aires, Antonio, et al.
Publicado: (2019)

Mucin Binding Protein of Lactobacillus casei Inhibits HT-29 Colorectal Cancer Cell Proliferation
por: Ju, Xuan, et al.
Publicado: (2023)

CTCF DNA-binding domain undergoes dynamic and selective protein–protein interactions
por: Zhou, Rong, et al.
Publicado: (2022)

The DNA-binding protein CST associates with the cohesin complex and promotes chromosome cohesion
por: Schuck, P. Logan, et al.
Publicado: (2021)

Mapping DNA sequence to transcription factor binding energy in vivo
por: Barnes, Stephanie L., et al.
Publicado: (2019)

Peptide‐Directed Binding for the Discovery of Modulators of α‐Helix‐Mediated Protein–Protein Interactions: Proof‐of‐Concept Studies with the Apoptosis Regulator Mcl‐1
por: Beekman, Andrew Michael, et al.
Publicado: (2017)

Protein–DNA binding dynamics predict transcriptional response to nutrients in archaea
por: Todor, Horia, et al.
Publicado: (2013)

Editorial: Modulating Prokaryotic Lifestyle by DNA-Binding Proteins: Learning from (Apparently) Simple Systems
por: Venkova, Tatiana, et al.
Publicado: (2017)

Targeted In Vivo Inhibition of Specific Protein–Protein Interactions Using Recombinant Antibodies
por: Zábrady, Matej, et al.
Publicado: (2014)

Inhibition of transcription of VP2 by mutations in the DNA binding domains of mink enteritis virus NS1 protein
por: Xie, Qianqian, et al.
Publicado: (2022)

The Sequence Characteristics and Binding Properties of the Odorant-Binding Protein 2 of Euplatypus parallelus to Semiochemicals
por: Cui, Guangchao, et al.
Publicado: (2023)

DBAC: A simple prediction method for protein binding hot spots based on burial levels and deeply buried atomic contacts
por: Li, Zhenhua, et al.
Publicado: (2011)

Gibbs Energy and Gene Expression Combined as a New Technique for Selecting Drug Targets for Inhibiting Specific Protein–Protein Interactions
por: Rietman, Edward A., et al.
Publicado: (2023)

Integrated cellular network of transcription regulations and protein-protein interactions
por: Wang, Yu-Chao, et al.
Publicado: (2010)

In vivo methylation of mtDNA reveals the dynamics of protein–mtDNA interactions
por: Rebelo, Adriana P., et al.
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_7klreskmqbldevrq6ar2g7jli2