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A survey and evaluations of histogram-based statistics in alignment-free sequence comparison

MOTIVATION: Since the dawn of the bioinformatics field, sequence alignment scores have been the main method for comparing sequences. However, alignment algorithms are quadratic, requiring long execution time. As alternatives, scientists have developed tens of alignment-free statistics for measuring...

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Detalles Bibliográficos
Autores principales: Luczak, Brian B, James, Benjamin T, Girgis, Hani Z
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6781583/
https://www.ncbi.nlm.nih.gov/pubmed/29220512
http://dx.doi.org/10.1093/bib/bbx161