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Inferring putative transmission clusters with Phydelity

Current phylogenetic clustering approaches for identifying pathogen transmission clusters are limited by their dependency on arbitrarily defined genetic distance thresholds for within-cluster divergence. Incomplete knowledge of a pathogen’s underlying dynamics often reduces the choice of distance th...

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Detalles Bibliográficos
Autores principales: Han, Alvin X, Parker, Edyth, Maurer-Stroh, Sebastian, Russell, Colin A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6785678/
https://www.ncbi.nlm.nih.gov/pubmed/31616568
http://dx.doi.org/10.1093/ve/vez039