Using Apache Spark on genome assembly for scalable overlap-graph reduction

BACKGROUND: De novo genome assembly is a technique that builds the genome of a specimen using overlaps of genomic fragments without additional work with reference sequence. Sequence fragments (called reads) are assembled as contigs and scaffolds by the overlaps. The quality of the de novo assembly d...

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Detalles Bibliográficos
Autores principales: Paul, Alexander J., Lawrence, Dylan, Song, Myoungkyu, Lim, Seung-Hwan, Pan, Chongle, Ahn, Tae-Hyuk
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805285/
https://www.ncbi.nlm.nih.gov/pubmed/31639049
http://dx.doi.org/10.1186/s40246-019-0227-1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805285/
https://www.ncbi.nlm.nih.gov/pubmed/31639049
http://dx.doi.org/10.1186/s40246-019-0227-1

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