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Using Apache Spark on genome assembly for scalable overlap-graph reduction
BACKGROUND: De novo genome assembly is a technique that builds the genome of a specimen using overlaps of genomic fragments without additional work with reference sequence. Sequence fragments (called reads) are assembled as contigs and scaffolds by the overlaps. The quality of the de novo assembly d...
| Autores principales: | , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2019
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805285/ https://www.ncbi.nlm.nih.gov/pubmed/31639049 http://dx.doi.org/10.1186/s40246-019-0227-1 |