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Synthetic Activators of Cell Migration Designed by Constructive Machine Learning

Constructive machine learning aims to create examples from its learned domain which are likely to exhibit similar properties. Here, a recurrent neural network was trained with the chemical structures of known cell‐migration modulators. This machine learning model was used to generate new molecules t...

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Detalles Bibliográficos
Autores principales: Bruns, Dominique, Merk, Daniel, Santhana Kumar, Karthiga, Baumgartner, Martin, Schneider, Gisbert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6807213/
https://www.ncbi.nlm.nih.gov/pubmed/31660283
http://dx.doi.org/10.1002/open.201900222
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author Bruns, Dominique
Merk, Daniel
Santhana Kumar, Karthiga
Baumgartner, Martin
Schneider, Gisbert
author_facet Bruns, Dominique
Merk, Daniel
Santhana Kumar, Karthiga
Baumgartner, Martin
Schneider, Gisbert
author_sort Bruns, Dominique
collection PubMed
description Constructive machine learning aims to create examples from its learned domain which are likely to exhibit similar properties. Here, a recurrent neural network was trained with the chemical structures of known cell‐migration modulators. This machine learning model was used to generate new molecules that mimic the training compounds. Two top‐scoring designs were synthesized, and tested for functional activity in a phenotypic spheroid cell migration assay. These computationally generated small molecules significantly increased the migration of medulloblastoma cells. The results further corroborate the applicability of constructive machine learning to the de novo design of druglike molecules with desired properties.
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spelling pubmed-68072132019-10-28 Synthetic Activators of Cell Migration Designed by Constructive Machine Learning Bruns, Dominique Merk, Daniel Santhana Kumar, Karthiga Baumgartner, Martin Schneider, Gisbert ChemistryOpen Full Papers Constructive machine learning aims to create examples from its learned domain which are likely to exhibit similar properties. Here, a recurrent neural network was trained with the chemical structures of known cell‐migration modulators. This machine learning model was used to generate new molecules that mimic the training compounds. Two top‐scoring designs were synthesized, and tested for functional activity in a phenotypic spheroid cell migration assay. These computationally generated small molecules significantly increased the migration of medulloblastoma cells. The results further corroborate the applicability of constructive machine learning to the de novo design of druglike molecules with desired properties. John Wiley and Sons Inc. 2019-10-23 /pmc/articles/PMC6807213/ /pubmed/31660283 http://dx.doi.org/10.1002/open.201900222 Text en © 2019 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Full Papers
Bruns, Dominique
Merk, Daniel
Santhana Kumar, Karthiga
Baumgartner, Martin
Schneider, Gisbert
Synthetic Activators of Cell Migration Designed by Constructive Machine Learning
title Synthetic Activators of Cell Migration Designed by Constructive Machine Learning
title_full Synthetic Activators of Cell Migration Designed by Constructive Machine Learning
title_fullStr Synthetic Activators of Cell Migration Designed by Constructive Machine Learning
title_full_unstemmed Synthetic Activators of Cell Migration Designed by Constructive Machine Learning
title_short Synthetic Activators of Cell Migration Designed by Constructive Machine Learning
title_sort synthetic activators of cell migration designed by constructive machine learning
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6807213/
https://www.ncbi.nlm.nih.gov/pubmed/31660283
http://dx.doi.org/10.1002/open.201900222
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