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Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing

Overlap extension polymerase chain reaction (PCR) is a powerful technology for DNA assembly. Based on this technology, we synthesized DNA templates, which were transcribed into sgRNA in vitro, and further detected their efficiency of purified sgRNAs with Cas9 nuclease. The sgRNAs synthesized by this...

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Detalles Bibliográficos
Autores principales: Hu, Zheng, Wang, Li, Shi, Zhaoying, Jiang, Jing, Li, Xiangning, Chen, Yonglong, Li, Kai, Luo, Dixian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814055/
https://www.ncbi.nlm.nih.gov/pubmed/31673328
http://dx.doi.org/10.1186/s13578-019-0350-7
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author Hu, Zheng
Wang, Li
Shi, Zhaoying
Jiang, Jing
Li, Xiangning
Chen, Yonglong
Li, Kai
Luo, Dixian
author_facet Hu, Zheng
Wang, Li
Shi, Zhaoying
Jiang, Jing
Li, Xiangning
Chen, Yonglong
Li, Kai
Luo, Dixian
author_sort Hu, Zheng
collection PubMed
description Overlap extension polymerase chain reaction (PCR) is a powerful technology for DNA assembly. Based on this technology, we synthesized DNA templates, which were transcribed into sgRNA in vitro, and further detected their efficiency of purified sgRNAs with Cas9 nuclease. The sgRNAs synthesized by this approach can effectively cleave the DNA fragments of interest in vitro and in vivo. Compared with the conventional method for generating sgRNA, it does not require construction of recombinant plasmids and design of primers to amplify sgRNA core fragment. Only several short primers with overlapped sequences are needed to assemble a DNA fragment as the template of sgRNA. This modified and simplified method is highly applicable and less time-consuming.
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spelling pubmed-68140552019-10-31 Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing Hu, Zheng Wang, Li Shi, Zhaoying Jiang, Jing Li, Xiangning Chen, Yonglong Li, Kai Luo, Dixian Cell Biosci Letter to the Editor Overlap extension polymerase chain reaction (PCR) is a powerful technology for DNA assembly. Based on this technology, we synthesized DNA templates, which were transcribed into sgRNA in vitro, and further detected their efficiency of purified sgRNAs with Cas9 nuclease. The sgRNAs synthesized by this approach can effectively cleave the DNA fragments of interest in vitro and in vivo. Compared with the conventional method for generating sgRNA, it does not require construction of recombinant plasmids and design of primers to amplify sgRNA core fragment. Only several short primers with overlapped sequences are needed to assemble a DNA fragment as the template of sgRNA. This modified and simplified method is highly applicable and less time-consuming. BioMed Central 2019-10-24 /pmc/articles/PMC6814055/ /pubmed/31673328 http://dx.doi.org/10.1186/s13578-019-0350-7 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Letter to the Editor
Hu, Zheng
Wang, Li
Shi, Zhaoying
Jiang, Jing
Li, Xiangning
Chen, Yonglong
Li, Kai
Luo, Dixian
Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing
title Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing
title_full Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing
title_fullStr Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing
title_full_unstemmed Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing
title_short Customized one-step preparation of sgRNA transcription templates via overlapping PCR Using short primers and its application in vitro and in vivo gene editing
title_sort customized one-step preparation of sgrna transcription templates via overlapping pcr using short primers and its application in vitro and in vivo gene editing
topic Letter to the Editor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814055/
https://www.ncbi.nlm.nih.gov/pubmed/31673328
http://dx.doi.org/10.1186/s13578-019-0350-7
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