gpart: human genome partitioning and visualization of high-density SNP data by identifying haplotype blocks

SUMMARY: For the analysis of high-throughput genomic data produced by next-generation sequencing (NGS) technologies, researchers need to identify linkage disequilibrium (LD) structure in the genome. In this work, we developed an R package gpart which provides clustering algorithms to define LD block...

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Detalles Bibliográficos
Autores principales: Kim, Sun Ah, Brossard, Myriam, Roshandel, Delnaz, Paterson, Andrew D, Bull, Shelley B, Yoo, Yun Joo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6821423/
https://www.ncbi.nlm.nih.gov/pubmed/31070701
http://dx.doi.org/10.1093/bioinformatics/btz308

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6821423/
https://www.ncbi.nlm.nih.gov/pubmed/31070701
http://dx.doi.org/10.1093/bioinformatics/btz308

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