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A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production
Campylobacteriosis is one of the most common foodborne diseases worldwide. Two Campylobacter species – C. jejuni and C. coli in poultry and poultry products are considered to be the main source of human campylobacteriosis. Therefore, studying Campylobacter status in poultry flocks is needed to preve...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6821646/ https://www.ncbi.nlm.nih.gov/pubmed/31708907 http://dx.doi.org/10.3389/fmicb.2019.02443 |
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author | Quyen, Than Linh Nordentoft, Steen Vinayaka, Aaydha Chidambara Ngo, Tien Anh Engelsmenn, Pia Sun, Yi Madsen, Mogens Bang, Dang Duong Wolff, Anders |
author_facet | Quyen, Than Linh Nordentoft, Steen Vinayaka, Aaydha Chidambara Ngo, Tien Anh Engelsmenn, Pia Sun, Yi Madsen, Mogens Bang, Dang Duong Wolff, Anders |
author_sort | Quyen, Than Linh |
collection | PubMed |
description | Campylobacteriosis is one of the most common foodborne diseases worldwide. Two Campylobacter species – C. jejuni and C. coli in poultry and poultry products are considered to be the main source of human campylobacteriosis. Therefore, studying Campylobacter status in poultry flocks is needed to prevent transmission of disease and reduce human risk, health cost, and economic losses. In this study, we adapted and used a Loop-Mediated Isothermal Amplification (LAMP) assay for specific, sensitive, simple and cost-effective rapid detection of C. jejuni and C. coli in the poultry production chain. Amplified LAMP products were detected using a small, low-cost portable commercial blue LED transilluminator and a direct visual detection strategy was demonstrated. By using optimized conditions for amplification a limit of detection (LOD) of 50 CFU/ml was achieved for testing of C. jejuni and C. coli in spiked chicken feces without enrichment. The method took 60–70 min from receiving the samples to the final results (including 30 min for amplification). The optimized LAMP showed a relative accuracy of 98.4%, a specificity of 97.9%, and a sensitivity of 100% in comparison to real-time PCR method. Cohen’s kappa index also showed an excellent agreement (0.94) between the two methods. The results showed that the method is specific, sensitive and is suitable to develop for rapid detection of Campylobacter spp. at poultry production. |
format | Online Article Text |
id | pubmed-6821646 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-68216462019-11-08 A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production Quyen, Than Linh Nordentoft, Steen Vinayaka, Aaydha Chidambara Ngo, Tien Anh Engelsmenn, Pia Sun, Yi Madsen, Mogens Bang, Dang Duong Wolff, Anders Front Microbiol Microbiology Campylobacteriosis is one of the most common foodborne diseases worldwide. Two Campylobacter species – C. jejuni and C. coli in poultry and poultry products are considered to be the main source of human campylobacteriosis. Therefore, studying Campylobacter status in poultry flocks is needed to prevent transmission of disease and reduce human risk, health cost, and economic losses. In this study, we adapted and used a Loop-Mediated Isothermal Amplification (LAMP) assay for specific, sensitive, simple and cost-effective rapid detection of C. jejuni and C. coli in the poultry production chain. Amplified LAMP products were detected using a small, low-cost portable commercial blue LED transilluminator and a direct visual detection strategy was demonstrated. By using optimized conditions for amplification a limit of detection (LOD) of 50 CFU/ml was achieved for testing of C. jejuni and C. coli in spiked chicken feces without enrichment. The method took 60–70 min from receiving the samples to the final results (including 30 min for amplification). The optimized LAMP showed a relative accuracy of 98.4%, a specificity of 97.9%, and a sensitivity of 100% in comparison to real-time PCR method. Cohen’s kappa index also showed an excellent agreement (0.94) between the two methods. The results showed that the method is specific, sensitive and is suitable to develop for rapid detection of Campylobacter spp. at poultry production. Frontiers Media S.A. 2019-10-24 /pmc/articles/PMC6821646/ /pubmed/31708907 http://dx.doi.org/10.3389/fmicb.2019.02443 Text en Copyright © 2019 Quyen, Nordentoft, Vinayaka, Ngo, Engelsmenn, Sun, Madsen, Bang and Wolff. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Quyen, Than Linh Nordentoft, Steen Vinayaka, Aaydha Chidambara Ngo, Tien Anh Engelsmenn, Pia Sun, Yi Madsen, Mogens Bang, Dang Duong Wolff, Anders A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production |
title | A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production |
title_full | A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production |
title_fullStr | A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production |
title_full_unstemmed | A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production |
title_short | A Sensitive, Specific and Simple Loop Mediated Isothermal Amplification Method for Rapid Detection of Campylobacter spp. in Broiler Production |
title_sort | sensitive, specific and simple loop mediated isothermal amplification method for rapid detection of campylobacter spp. in broiler production |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6821646/ https://www.ncbi.nlm.nih.gov/pubmed/31708907 http://dx.doi.org/10.3389/fmicb.2019.02443 |
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