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A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence
Aging is the biggest risk factor for cancer, but the mechanisms linking these two processes remain unclear. Using GTEx and TCGA data, we compared genes differentially expressed with age and genes differentially expressed in cancer among nine human tissues. In most tissues, aging and cancer gene expr...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6826163/ https://www.ncbi.nlm.nih.gov/pubmed/31560156 http://dx.doi.org/10.1111/acel.13041 |
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author | Chatsirisupachai, Kasit Palmer, Daniel Ferreira, Susana de Magalhães, João Pedro |
author_facet | Chatsirisupachai, Kasit Palmer, Daniel Ferreira, Susana de Magalhães, João Pedro |
author_sort | Chatsirisupachai, Kasit |
collection | PubMed |
description | Aging is the biggest risk factor for cancer, but the mechanisms linking these two processes remain unclear. Using GTEx and TCGA data, we compared genes differentially expressed with age and genes differentially expressed in cancer among nine human tissues. In most tissues, aging and cancer gene expression pattern changed in the opposite direction. The exception was thyroid and uterus, where we found transcriptomic changes in the same direction in aging and in their corresponding cancers. The overlapping sets between genes differentially expressed with age and genes differentially expressed in cancer across tissues were enriched for several processes, mainly cell cycle and the immune system. Moreover, cellular senescence signatures, derived from a meta‐analysis, changed in the same direction as aging in human tissues and in the opposite direction of cancer signatures. Therefore, transcriptomic changes in aging and in cellular senescence might relate to a decrease in cell proliferation, while cancer transcriptomic changes shift toward enhanced cell division. Our results highlight the complex relationship between aging and cancer and suggest that, while in general aging processes might be opposite to cancer, the transcriptomic links between human aging and cancer are tissue‐specific. |
format | Online Article Text |
id | pubmed-6826163 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-68261632019-12-01 A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence Chatsirisupachai, Kasit Palmer, Daniel Ferreira, Susana de Magalhães, João Pedro Aging Cell Short Take Aging is the biggest risk factor for cancer, but the mechanisms linking these two processes remain unclear. Using GTEx and TCGA data, we compared genes differentially expressed with age and genes differentially expressed in cancer among nine human tissues. In most tissues, aging and cancer gene expression pattern changed in the opposite direction. The exception was thyroid and uterus, where we found transcriptomic changes in the same direction in aging and in their corresponding cancers. The overlapping sets between genes differentially expressed with age and genes differentially expressed in cancer across tissues were enriched for several processes, mainly cell cycle and the immune system. Moreover, cellular senescence signatures, derived from a meta‐analysis, changed in the same direction as aging in human tissues and in the opposite direction of cancer signatures. Therefore, transcriptomic changes in aging and in cellular senescence might relate to a decrease in cell proliferation, while cancer transcriptomic changes shift toward enhanced cell division. Our results highlight the complex relationship between aging and cancer and suggest that, while in general aging processes might be opposite to cancer, the transcriptomic links between human aging and cancer are tissue‐specific. John Wiley and Sons Inc. 2019-09-27 2019-12 /pmc/articles/PMC6826163/ /pubmed/31560156 http://dx.doi.org/10.1111/acel.13041 Text en © 2019 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Take Chatsirisupachai, Kasit Palmer, Daniel Ferreira, Susana de Magalhães, João Pedro A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
title | A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
title_full | A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
title_fullStr | A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
title_full_unstemmed | A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
title_short | A human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
title_sort | human tissue‐specific transcriptomic analysis reveals a complex relationship between aging, cancer, and cellular senescence |
topic | Short Take |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6826163/ https://www.ncbi.nlm.nih.gov/pubmed/31560156 http://dx.doi.org/10.1111/acel.13041 |
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