A Sequence Distance Graph framework for genome assembly and analysis

The Sequence Distance Graph (SDG) framework works with genome assembly graphs and raw data from paired, linked and long reads. It includes a simple deBruijn graph module, and can import graphs using the graphical fragment assembly (GFA) format. It also maps raw reads onto graphs, and provides a Pyth...

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Detalles Bibliográficos
Autores principales: Yanes, Luis, Garcia Accinelli, Gonzalo, Wright, Jonathan, Ward, Ben J., Clavijo, Bernardo J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2019
Materias:
Software Tool Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6833988/
https://www.ncbi.nlm.nih.gov/pubmed/31723420
http://dx.doi.org/10.12688/f1000research.20233.1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6833988/
https://www.ncbi.nlm.nih.gov/pubmed/31723420
http://dx.doi.org/10.12688/f1000research.20233.1

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