Recommendations for performance optimizations when using GATK3.8 and GATK4

BACKGROUND: Use of the Genome Analysis Toolkit (GATK) continues to be the standard practice in genomic variant calling in both research and the clinic. Recently the toolkit has been rapidly evolving. Significant computational performance improvements have been introduced in GATK3.8 through collabora...

Descripción completa

Detalles Bibliográficos
Autores principales: Heldenbrand, Jacob R, Baheti, Saurabh, Bockol, Matthew A, Drucker, Travis M, Hart, Steven N, Hudson, Matthew E, Iyer, Ravishankar K, Kalmbach, Michael T, Kendig, Katherine I, Klee, Eric W, Mattson, Nathan R, Wieben, Eric D, Wiepert, Mathieu, Wildman, Derek E, Mainzer, Liudmila S
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6842142/
https://www.ncbi.nlm.nih.gov/pubmed/31703611
http://dx.doi.org/10.1186/s12859-019-3169-7

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6842142/
https://www.ncbi.nlm.nih.gov/pubmed/31703611
http://dx.doi.org/10.1186/s12859-019-3169-7

Ejemplares similares