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How to design a dose-finding study on combined agents: Choice of design and development of R functions
BACKGROUND: In oncology, the aim of dose-finding phase I studies is to find the maximum tolerated dose for further studies. The use of combinations of two or more agents is increasing. Several dose-finding designs have been proposed for this situation. Numerous publications have however pointed out...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6844553/ https://www.ncbi.nlm.nih.gov/pubmed/31710632 http://dx.doi.org/10.1371/journal.pone.0224940 |
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author | Ezzalfani, Monia |
author_facet | Ezzalfani, Monia |
author_sort | Ezzalfani, Monia |
collection | PubMed |
description | BACKGROUND: In oncology, the aim of dose-finding phase I studies is to find the maximum tolerated dose for further studies. The use of combinations of two or more agents is increasing. Several dose-finding designs have been proposed for this situation. Numerous publications have however pointed out the complexity of evaluating therapies in combination due to difficulties in choosing between different designs for an actual trial, as well as complications related to their implementation and application in practice. METHODS: In this work, we propose R functions for Wang and Ivanova’s approach. These functions compute the dose for the next patients enrolled and provide a simulation study in order to calibrate the design before it is applied and to assess the performance of the design in different scenarios of dose-toxicity relationships. This choice of the method was supported by a simulation study which the aim was to compare two designs in the context of an actual phase I trial: i) in 2005, Wang and Ivanova developed an empirical three-parameter model-based method in Bayesian inference, ii) in 2008, Yuan and Yin proposed a simple, adaptive two-dimensional dose-finding design. In particular, they converted the two-dimensional dose-finding trial to a series of one-dimensional dose-finding sub-trials by setting the dose of one drug at a fixed level. The performance assessment of Wang’s design was then compared with those of designs presented in the paper by Hirakawa et al. (2015) in their simulation context. RESULTS AND CONCLUSION: It is recommended to assess the performances of the designs in the context of the clinical trial before beginning the trial. The two-dimensional dose-finding design proposed by Wang and Ivanova is a comprehensive approach that yields good performances. The two R functions that we propose can facilitate the use of this design in practice. |
format | Online Article Text |
id | pubmed-6844553 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-68445532019-11-15 How to design a dose-finding study on combined agents: Choice of design and development of R functions Ezzalfani, Monia PLoS One Research Article BACKGROUND: In oncology, the aim of dose-finding phase I studies is to find the maximum tolerated dose for further studies. The use of combinations of two or more agents is increasing. Several dose-finding designs have been proposed for this situation. Numerous publications have however pointed out the complexity of evaluating therapies in combination due to difficulties in choosing between different designs for an actual trial, as well as complications related to their implementation and application in practice. METHODS: In this work, we propose R functions for Wang and Ivanova’s approach. These functions compute the dose for the next patients enrolled and provide a simulation study in order to calibrate the design before it is applied and to assess the performance of the design in different scenarios of dose-toxicity relationships. This choice of the method was supported by a simulation study which the aim was to compare two designs in the context of an actual phase I trial: i) in 2005, Wang and Ivanova developed an empirical three-parameter model-based method in Bayesian inference, ii) in 2008, Yuan and Yin proposed a simple, adaptive two-dimensional dose-finding design. In particular, they converted the two-dimensional dose-finding trial to a series of one-dimensional dose-finding sub-trials by setting the dose of one drug at a fixed level. The performance assessment of Wang’s design was then compared with those of designs presented in the paper by Hirakawa et al. (2015) in their simulation context. RESULTS AND CONCLUSION: It is recommended to assess the performances of the designs in the context of the clinical trial before beginning the trial. The two-dimensional dose-finding design proposed by Wang and Ivanova is a comprehensive approach that yields good performances. The two R functions that we propose can facilitate the use of this design in practice. Public Library of Science 2019-11-11 /pmc/articles/PMC6844553/ /pubmed/31710632 http://dx.doi.org/10.1371/journal.pone.0224940 Text en © 2019 Monia Ezzalfani http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Ezzalfani, Monia How to design a dose-finding study on combined agents: Choice of design and development of R functions |
title | How to design a dose-finding study on combined agents: Choice of design and development of R functions |
title_full | How to design a dose-finding study on combined agents: Choice of design and development of R functions |
title_fullStr | How to design a dose-finding study on combined agents: Choice of design and development of R functions |
title_full_unstemmed | How to design a dose-finding study on combined agents: Choice of design and development of R functions |
title_short | How to design a dose-finding study on combined agents: Choice of design and development of R functions |
title_sort | how to design a dose-finding study on combined agents: choice of design and development of r functions |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6844553/ https://www.ncbi.nlm.nih.gov/pubmed/31710632 http://dx.doi.org/10.1371/journal.pone.0224940 |
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