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Training-free measures based on algorithmic probability identify high nucleosome occupancy in DNA sequences

We introduce and study a set of training-free methods of an information-theoretic and algorithmic complexity nature that we apply to DNA sequences to identify their potential to identify nucleosomal binding sites. We test the measures on well-studied genomic sequences of different sizes drawn from d...

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Detalles Bibliográficos
Autores principales: Zenil, Hector, Minary, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6846163/
https://www.ncbi.nlm.nih.gov/pubmed/31511887
http://dx.doi.org/10.1093/nar/gkz750