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Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes

Biomanufacturing exhibits inherent variability that can lead to variation in performance attributes and batch failure. To help ensure process consistency and product quality the development of predictive models and integrated control strategies is a promising approach. In this study, a feedback cont...

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Autores principales: Schmitt, John, Downey, Brandon, Beller, Justin, Russell, Brian, Quach, Anthony, Lyon, David, Curran, Meredith, Mulukutla, Bhanu Chandra, Chu, Chia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852022/
https://www.ncbi.nlm.nih.gov/pubmed/31062870
http://dx.doi.org/10.1002/bit.27015
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author Schmitt, John
Downey, Brandon
Beller, Justin
Russell, Brian
Quach, Anthony
Lyon, David
Curran, Meredith
Mulukutla, Bhanu Chandra
Chu, Chia
author_facet Schmitt, John
Downey, Brandon
Beller, Justin
Russell, Brian
Quach, Anthony
Lyon, David
Curran, Meredith
Mulukutla, Bhanu Chandra
Chu, Chia
author_sort Schmitt, John
collection PubMed
description Biomanufacturing exhibits inherent variability that can lead to variation in performance attributes and batch failure. To help ensure process consistency and product quality the development of predictive models and integrated control strategies is a promising approach. In this study, a feedback controller was developed to limit excessive lactate production, a widespread metabolic phenomenon that is negatively associated with culture performance and product quality. The controller was developed by applying machine learning strategies to historical process development data, resulting in a forecast model that could identify whether a run would result in lactate consumption or accumulation. In addition, this exercise identified a correlation between increased amino acid consumption and low observed lactate production leading to the mechanistic hypothesis that there is a deficiency in the link between glycolysis and the tricarboxylic acid cycle. Using the correlative process parameters to build mechanistic insight and applying this to predictive models of lactate concentration, a dynamic model predictive controller (MPC) for lactate was designed. This MPC was implemented experimentally on a process known to exhibit high lactate accumulation and successfully drove the cell cultures towards a lactate consuming state. In addition, an increase in specific titer productivity was observed when compared with non‐MPC controlled reactors.
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spelling pubmed-68520222019-11-18 Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes Schmitt, John Downey, Brandon Beller, Justin Russell, Brian Quach, Anthony Lyon, David Curran, Meredith Mulukutla, Bhanu Chandra Chu, Chia Biotechnol Bioeng ARTICLES Biomanufacturing exhibits inherent variability that can lead to variation in performance attributes and batch failure. To help ensure process consistency and product quality the development of predictive models and integrated control strategies is a promising approach. In this study, a feedback controller was developed to limit excessive lactate production, a widespread metabolic phenomenon that is negatively associated with culture performance and product quality. The controller was developed by applying machine learning strategies to historical process development data, resulting in a forecast model that could identify whether a run would result in lactate consumption or accumulation. In addition, this exercise identified a correlation between increased amino acid consumption and low observed lactate production leading to the mechanistic hypothesis that there is a deficiency in the link between glycolysis and the tricarboxylic acid cycle. Using the correlative process parameters to build mechanistic insight and applying this to predictive models of lactate concentration, a dynamic model predictive controller (MPC) for lactate was designed. This MPC was implemented experimentally on a process known to exhibit high lactate accumulation and successfully drove the cell cultures towards a lactate consuming state. In addition, an increase in specific titer productivity was observed when compared with non‐MPC controlled reactors. John Wiley and Sons Inc. 2019-05-27 2019-09 /pmc/articles/PMC6852022/ /pubmed/31062870 http://dx.doi.org/10.1002/bit.27015 Text en © 2019 The Authors. Biotechnology and Bioengineering Published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle ARTICLES
Schmitt, John
Downey, Brandon
Beller, Justin
Russell, Brian
Quach, Anthony
Lyon, David
Curran, Meredith
Mulukutla, Bhanu Chandra
Chu, Chia
Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes
title Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes
title_full Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes
title_fullStr Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes
title_full_unstemmed Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes
title_short Forecasting and control of lactate bifurcation in Chinese hamster ovary cell culture processes
title_sort forecasting and control of lactate bifurcation in chinese hamster ovary cell culture processes
topic ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852022/
https://www.ncbi.nlm.nih.gov/pubmed/31062870
http://dx.doi.org/10.1002/bit.27015
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