SNAPPy: A snakemake pipeline for scalable HIV-1 subtyping by phylogenetic pairing

Human immunodeficiency virus 1 (HIV-1) genome sequencing is routinely done for drug resistance monitoring in hospitals worldwide. Subtyping these extensive datasets of HIV-1 sequences is a critical first step in molecular epidemiology and evolution studies. The clinical relevance of HIV-1 subtypes i...

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Detalles Bibliográficos
Autores principales: Araújo, Pedro M M, Martins, Joana S, Osório, Nuno S
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Resources
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6863187/
https://www.ncbi.nlm.nih.gov/pubmed/31768265
http://dx.doi.org/10.1093/ve/vez050

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6863187/
https://www.ncbi.nlm.nih.gov/pubmed/31768265
http://dx.doi.org/10.1093/ve/vez050

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