Cargando…

Anti-methanogenic effect of rhubarb (Rheum spp.) – An in silico docking studies on methyl-coenzyme M reductase (MCR)

The present study explored anti-methanogenic properties of rhubarb compounds using in silico analysis on methyl-coenzyme M reductase (MCR) for identifying its anti-methanogen mechanism. To identify pharmacokinetics of 35 compounds from rhubarb, molecular docking and ADME analysis were performed agai...

Descripción completa

Detalles Bibliográficos
Autores principales:	Arokiyaraj, Selvaraj, Stalin, Antony, Shin, Hakdong
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Elsevier 2019
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6864367/ https://www.ncbi.nlm.nih.gov/pubmed/31762609 http://dx.doi.org/10.1016/j.sjbs.2019.06.008

Ejemplares similares

Anti-Methanogenic Effect of Phytochemicals on Methyl-Coenzyme M Reductase—Potential: In Silico and Molecular Docking Studies for Environmental Protection
por: Dinakarkumar, Yuvaraj, et al.
Publicado: (2021)

Geranii Herba as a Potential Inhibitor of SARS-CoV-2 Main 3CL(pro), Spike RBD, and Regulation of Unfolded Protein Response: An In Silico Approach
por: Arokiyaraj, Selvaraj, et al.
Publicado: (2020)

Antioxidant Activity in Rheum emodi Wall (Himalayan Rhubarb)
por: Park, Sang Koo, et al.
Publicado: (2021)

Localization of Methyl-Coenzyme M Reductase as Metabolic Marker for Diverse Methanogenic Archaea
por: Wrede, Christoph, et al.
Publicado: (2013)

Methyl coenzyme M reductase (mcrA) gene abundance correlates with activity measurements of methanogenic H(2)/CO(2)-enriched anaerobic biomass
por: Morris, Rachel, et al.
Publicado: (2014)

Complete chloroplast genome sequence of an alpine rhubarb Rheum likiangense
por: Liu, Mingyu, et al.
Publicado: (2020)

Post-translational thioamidation of methyl-coenzyme M reductase, a key enzyme in methanogenic and methanotrophic Archaea
por: Nayak, Dipti D, et al.
Publicado: (2017)

The progress and prospect of natural components in rhubarb (Rheum ribes L.) in the treatment of renal fibrosis
por: Wang, Yangyang, et al.
Publicado: (2022)

Occurrence and expression of novel methyl-coenzyme M reductase gene (mcrA) variants in hot spring sediments
por: McKay, Luke J., et al.
Publicado: (2017)

McrD binds asymmetrically to methyl-coenzyme M reductase improving active-site accessibility during assembly
por: Chadwick, Grayson L., et al.
Publicado: (2023)

Ecological assessment and environmental niche modelling of Himalayan rhubarb (Rheum webbianum Royle) in northwest Himalaya
por: Wani, Ishfaq Ahmad, et al.
Publicado: (2021)

The genome of the glasshouse plant noble rhubarb (Rheum nobile) provides a window into alpine adaptation
por: Feng, Tao, et al.
Publicado: (2023)

Anti-amebic effects of Chinese rhubarb (Rheum palmatum) leaves' extract, the anthraquinone rhein and related compounds
por: Espinosa, Avelina, et al.
Publicado: (2020)

Correction: Ecological assessment and environmental niche modelling of Himalayan rhubarb (Rheum webbianum Royle) in northwest Himalaya
Publicado: (2021)

Varietal Differences in Juice, Pomace and Root Biochemical Characteristics of Four Rhubarb (Rheum rhabarbarum L.) Cultivars
por: Kharchenko, Viktor, et al.
Publicado: (2023)

A chromosome-scale Rhubarb (Rheum tanguticum) genome assembly provides insights into the evolution of anthraquinone biosynthesis
por: Li, Ying, et al.
Publicado: (2023)

The Effect of Chinese Rhubarb, Rheum officinale, with and without Benazepril on the Progression of Naturally Occurring Chronic Kidney Disease in Cats
por: Hanzlicek, A.S., et al.
Publicado: (2014)

Chemical composition, antioxidant activity and antibacterial mechanism of action from Marsilea minuta leaf hexane: methanol extract
por: Arokiyaraj, Selvaraj, et al.
Publicado: (2018)

In vivo activation of methyl-coenzyme M reductase by carbon monoxide
por: Zhou, Yuzhen, et al.
Publicado: (2013)

Methyl-Coenzyme M Reductase and Its Post-translational Modifications
por: Chen, Hao, et al.
Publicado: (2020)

Microbiome digital signature of MCR genes – an in silico approach to study the diversity of methanogenic population in laboratory-developed and pilot-scale anaerobic digesters
por: Ponni Keerthana, K., et al.
Publicado: (2019)

Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi
por: Boyd, Joel A., et al.
Publicado: (2019)

Expression of divergent methyl/alkyl coenzyme M reductases from uncultured archaea
por: Shao, Nana, et al.
Publicado: (2022)

Induction of Cell Cycle Arrest and Apoptosis by Physcion, an Anthraquinone Isolated From Rhubarb (Rhizomes of Rheum tanguticum), in MDA-MB-231 Human Breast Cancer Cells
por: Hong, Ji-Young, et al.
Publicado: (2014)

Antioxidant Activities of Bioactive Compounds Isolated from Rheum emodi Wall (Himalayan Rhubarb) Based on LC-DAD-ESI/MS and Preparative LC/MS System
por: Park, Sang Koo
Publicado: (2022)

In-silico protein-ligand docking studies against the estrogen protein of breast cancer using pharmacophore based virtual screening approaches
por: Sahayarayan, Jesudass Joseph, et al.
Publicado: (2021)

Geometric and Electronic Structures of the Ni(I) and Methyl−Ni(III) Intermediates of Methyl-Coenzyme M Reductase
por: Sarangi, Ritimukta, et al.
Publicado: (2009)

Overview of Diverse Methyl/Alkyl-Coenzyme M Reductases and Considerations for Their Potential Heterologous Expression
por: Gendron, Aleksei, et al.
Publicado: (2022)

In Silico Neuroprotective Effects of Specific Rheum palmatum Metabolites on Parkinson’s Disease Targets
por: Garcia, Patrick Jay B., et al.
Publicado: (2023)

Molecular docking analysis of flavonoids with aldose reductase
por: Kannayiram, Kasthuri, et al.
Publicado: (2022)

Rhubarb: the wondrous drug
por: Unkovskaya, Maria
Publicado: (1993)

Insights into the ecological roles and evolution of methyl-coenzyme M reductase-containing hot spring Archaea
por: Hua, Zheng-Shuang, et al.
Publicado: (2019)

Molecular Docking Studies on the Anti-viral Effects of Compounds From Kabasura Kudineer on SARS-CoV-2 3CL(pro)
por: Vincent, Savariar, et al.
Publicado: (2020)

Rheum rhaponticum and Rheum rhabarbarum Extracts as Modulators of Endothelial Cell Inflammatory Response
por: Liudvytska, Oleksandra, et al.
Publicado: (2023)

Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis
por: Scanlan, Pauline D, et al.
Publicado: (2008)

Methanogenic archaea in subsurface coal seams are biogeographically distinct: an analysis of metagenomically‐derived mcrA sequences
por: Campbell, Bronwyn C., et al.
Publicado: (2022)

The Genome Characteristics and Predicted Function of Methyl-Group Oxidation Pathway in the Obligate Aceticlastic Methanogens, Methanosaeta spp
por: Zhu, Jinxing, et al.
Publicado: (2012)

Proteomics and metabolomics of raw rhubarb and wine-processed rhubarb in the treatment of rats with intracerebral hemorrhage
por: Wang, Kun, et al.
Publicado: (2020)

Functional interactions between posttranslationally modified amino acids of methyl-coenzyme M reductase in Methanosarcina acetivorans
por: Nayak, Dipti D., et al.
Publicado: (2020)

Comparison of droplet digital PCR and quantitative real-time PCR in mcrA-based methanogen community analysis
por: Kim, Tae Gwan, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_qtc3u9eg5v35qfd32sauduuqp1