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Improved metagenomic analysis with Kraken 2

Although Kraken’s k-mer-based approach provides a fast taxonomic classification of metagenomic sequence data, its large memory requirements can be limiting for some applications. Kraken 2 improves upon Kraken 1 by reducing memory usage by 85%, allowing greater amounts of reference genomic data to be...

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Detalles Bibliográficos
Autores principales: Wood, Derrick E., Lu, Jennifer, Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6883579/
https://www.ncbi.nlm.nih.gov/pubmed/31779668
http://dx.doi.org/10.1186/s13059-019-1891-0