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HMMRATAC: a Hidden Markov ModeleR for ATAC-seq

ATAC-seq has been widely adopted to identify accessible chromatin regions across the genome. However, current data analysis still utilizes approaches initially designed for ChIP-seq or DNase-seq, without considering the transposase digested DNA fragments that contain additional nucleosome positionin...

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Detalles Bibliográficos
Autores principales: Tarbell, Evan D, Liu, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6895260/
https://www.ncbi.nlm.nih.gov/pubmed/31199868
http://dx.doi.org/10.1093/nar/gkz533