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Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells

CHoP‐In (CRISPR/Cas9‐mediated Homology‐independent PCR‐product integration) is a fast, non‐homologous end‐joining based, strategy for genomic editing in mammalian cells. There is no requirement for cloning in generation of the integration donor, instead the desired integration donor is produced as a...

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Autores principales: Manna, Paul T., Davis, Luther J., Robinson, Margaret S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons A/S 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6899835/
https://www.ncbi.nlm.nih.gov/pubmed/31503392
http://dx.doi.org/10.1111/tra.12696
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author Manna, Paul T.
Davis, Luther J.
Robinson, Margaret S.
author_facet Manna, Paul T.
Davis, Luther J.
Robinson, Margaret S.
author_sort Manna, Paul T.
collection PubMed
description CHoP‐In (CRISPR/Cas9‐mediated Homology‐independent PCR‐product integration) is a fast, non‐homologous end‐joining based, strategy for genomic editing in mammalian cells. There is no requirement for cloning in generation of the integration donor, instead the desired integration donor is produced as a polymerase chain reaction (PCR) product, flanked by the Cas9 recognition sequences of the target locus. When co‐transfected with the cognate Cas9 and guide RNA, double strand breaks are introduced at the target genomic locus and at both ends of the PCR product. This allows incorporation into the genomic locus via hon‐homologous end joining. The approach is versatile, allowing N‐terminal, C‐terminal or internal tag integration and gives predictable genomic integrations, as demonstrated for a selection of well characterised membrane trafficking proteins. The lack of donor vectors offers advantages over existing methods in terms of both speed and hands‐on time. As such this approach will be a useful addition to the genome editing toolkit of those working in mammalian cell systems.
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spelling pubmed-68998352019-12-19 Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells Manna, Paul T. Davis, Luther J. Robinson, Margaret S. Traffic Toolbox CHoP‐In (CRISPR/Cas9‐mediated Homology‐independent PCR‐product integration) is a fast, non‐homologous end‐joining based, strategy for genomic editing in mammalian cells. There is no requirement for cloning in generation of the integration donor, instead the desired integration donor is produced as a polymerase chain reaction (PCR) product, flanked by the Cas9 recognition sequences of the target locus. When co‐transfected with the cognate Cas9 and guide RNA, double strand breaks are introduced at the target genomic locus and at both ends of the PCR product. This allows incorporation into the genomic locus via hon‐homologous end joining. The approach is versatile, allowing N‐terminal, C‐terminal or internal tag integration and gives predictable genomic integrations, as demonstrated for a selection of well characterised membrane trafficking proteins. The lack of donor vectors offers advantages over existing methods in terms of both speed and hands‐on time. As such this approach will be a useful addition to the genome editing toolkit of those working in mammalian cell systems. John Wiley & Sons A/S 2019-10-17 2019-12 /pmc/articles/PMC6899835/ /pubmed/31503392 http://dx.doi.org/10.1111/tra.12696 Text en © 2019 The Authors. Traffic published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Toolbox
Manna, Paul T.
Davis, Luther J.
Robinson, Margaret S.
Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells
title Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells
title_full Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells
title_fullStr Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells
title_full_unstemmed Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells
title_short Fast and cloning‐free CRISPR/Cas9‐mediated genomic editing in mammalian cells
title_sort fast and cloning‐free crispr/cas9‐mediated genomic editing in mammalian cells
topic Toolbox
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6899835/
https://www.ncbi.nlm.nih.gov/pubmed/31503392
http://dx.doi.org/10.1111/tra.12696
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