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Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization

Senescence is induced by various stimuli such as oncogene expression and telomere shortening, referred to as oncogene-induced senescence (OIS) and replicative senescence (RS), respectively, and accompanied by global transcriptional alterations and 3D genome reorganization. Here, we demonstrate that...

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Autores principales: Iwasaki, Osamu, Tanizawa, Hideki, Kim, Kyoung-Dong, Kossenkov, Andrew, Nacarelli, Timothy, Tashiro, Sanki, Majumdar, Sonali, Showe, Louise C., Zhang, Rugang, Noma, Ken-ichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6908677/
https://www.ncbi.nlm.nih.gov/pubmed/31831736
http://dx.doi.org/10.1038/s41467-019-13604-5
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author Iwasaki, Osamu
Tanizawa, Hideki
Kim, Kyoung-Dong
Kossenkov, Andrew
Nacarelli, Timothy
Tashiro, Sanki
Majumdar, Sonali
Showe, Louise C.
Zhang, Rugang
Noma, Ken-ichi
author_facet Iwasaki, Osamu
Tanizawa, Hideki
Kim, Kyoung-Dong
Kossenkov, Andrew
Nacarelli, Timothy
Tashiro, Sanki
Majumdar, Sonali
Showe, Louise C.
Zhang, Rugang
Noma, Ken-ichi
author_sort Iwasaki, Osamu
collection PubMed
description Senescence is induced by various stimuli such as oncogene expression and telomere shortening, referred to as oncogene-induced senescence (OIS) and replicative senescence (RS), respectively, and accompanied by global transcriptional alterations and 3D genome reorganization. Here, we demonstrate that the human condensin II complex participates in senescence via gene regulation and reorganization of euchromatic A and heterochromatic B compartments. Both OIS and RS are accompanied by A-to-B and B-to-A compartmental transitions, the latter of which occur more frequently and are undergone by 14% (430 Mb) of the human genome. Mechanistically, condensin is enriched in A compartments and implicated in B-to-A transitions. The full activation of senescence genes (SASP genes and p53 targets) requires condensin; its depletion impairs senescence markers. This study describes that condensin reinforces euchromatic A compartments and promotes B-to-A transitions, both of which are coupled to optimal expression of senescence genes, thereby allowing condensin to contribute to senescent processes.
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spelling pubmed-69086772019-12-16 Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization Iwasaki, Osamu Tanizawa, Hideki Kim, Kyoung-Dong Kossenkov, Andrew Nacarelli, Timothy Tashiro, Sanki Majumdar, Sonali Showe, Louise C. Zhang, Rugang Noma, Ken-ichi Nat Commun Article Senescence is induced by various stimuli such as oncogene expression and telomere shortening, referred to as oncogene-induced senescence (OIS) and replicative senescence (RS), respectively, and accompanied by global transcriptional alterations and 3D genome reorganization. Here, we demonstrate that the human condensin II complex participates in senescence via gene regulation and reorganization of euchromatic A and heterochromatic B compartments. Both OIS and RS are accompanied by A-to-B and B-to-A compartmental transitions, the latter of which occur more frequently and are undergone by 14% (430 Mb) of the human genome. Mechanistically, condensin is enriched in A compartments and implicated in B-to-A transitions. The full activation of senescence genes (SASP genes and p53 targets) requires condensin; its depletion impairs senescence markers. This study describes that condensin reinforces euchromatic A compartments and promotes B-to-A transitions, both of which are coupled to optimal expression of senescence genes, thereby allowing condensin to contribute to senescent processes. Nature Publishing Group UK 2019-12-12 /pmc/articles/PMC6908677/ /pubmed/31831736 http://dx.doi.org/10.1038/s41467-019-13604-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Iwasaki, Osamu
Tanizawa, Hideki
Kim, Kyoung-Dong
Kossenkov, Andrew
Nacarelli, Timothy
Tashiro, Sanki
Majumdar, Sonali
Showe, Louise C.
Zhang, Rugang
Noma, Ken-ichi
Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
title Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
title_full Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
title_fullStr Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
title_full_unstemmed Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
title_short Involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
title_sort involvement of condensin in cellular senescence through gene regulation and compartmental reorganization
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6908677/
https://www.ncbi.nlm.nih.gov/pubmed/31831736
http://dx.doi.org/10.1038/s41467-019-13604-5
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