Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study

BACKGROUND: Nesting is common in LTR retrotransposons, especially in large genomes containing a high number of elements. RESULTS: We analyzed 12 plant genomes and obtained 1491 pairs of nested and original (pre-existing) LTR retrotransposons. We systematically analyzed mutual nesting of individual L...

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Detalles Bibliográficos
Autores principales: Jedlicka, Pavel, Lexa, Matej, Vanat, Ivan, Hobza, Roman, Kejnovsky, Eduard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6911290/
https://www.ncbi.nlm.nih.gov/pubmed/31871489
http://dx.doi.org/10.1186/s13100-019-0186-z

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6911290/
https://www.ncbi.nlm.nih.gov/pubmed/31871489
http://dx.doi.org/10.1186/s13100-019-0186-z

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