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Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches

The aims of this study were i) to evaluate the possibility to detect and possibly quantify microorganisms belonging to different domains experimentally spiked in smoked salmon at known concentrations using shotgun metagenomics; ii) to compare the sequencing results using four bioinformatic tools. Th...

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Detalles Bibliográficos
Autores principales: Cesare, Alessandra De, Oliveri, Chiara, Lucchi, Alex, Pasquali, Frederique, Manfreda, Gerardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PAGEPress Publications, Pavia, Italy 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6912132/
https://www.ncbi.nlm.nih.gov/pubmed/31897401
http://dx.doi.org/10.4081/ijfs.2019.8462