Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverage

BACKGROUND: In many fields of biomedical research, it is important to estimate phylogenetic distances between taxa based on low-coverage sequencing reads. Major applications are, for example, phylogeny reconstruction, species identification from small sequencing samples, or bacterial strain typing i...

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Detalles Bibliográficos
Autores principales: Lau, Anna-Katharina, Dörrer, Svenja, Leimeister, Chris-André, Bleidorn, Christoph, Morgenstern, Burkhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6916211/
https://www.ncbi.nlm.nih.gov/pubmed/31842735
http://dx.doi.org/10.1186/s12859-019-3205-7

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6916211/
https://www.ncbi.nlm.nih.gov/pubmed/31842735
http://dx.doi.org/10.1186/s12859-019-3205-7

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