TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools

Chromosome-scale genome sequence assemblies underpin pan-genomic studies. Recent genome assembly efforts in the large-genome Triticeae crops wheat and barley have relied on the commercial closed-source assembly algorithm DeNovoMagic. We present TRITEX, an open-source computational workflow that comb...

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Detalles Bibliográficos
Autores principales: Monat, Cécile, Padmarasu, Sudharsan, Lux, Thomas, Wicker, Thomas, Gundlach, Heidrun, Himmelbach, Axel, Ens, Jennifer, Li, Chengdao, Muehlbauer, Gary J., Schulman, Alan H., Waugh, Robbie, Braumann, Ilka, Pozniak, Curtis, Scholz, Uwe, Mayer, Klaus F. X., Spannagl, Manuel, Stein, Nils, Mascher, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6918601/
https://www.ncbi.nlm.nih.gov/pubmed/31849336
http://dx.doi.org/10.1186/s13059-019-1899-5

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6918601/
https://www.ncbi.nlm.nih.gov/pubmed/31849336
http://dx.doi.org/10.1186/s13059-019-1899-5

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