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Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?
BACKGROUND: Hi-C is derived from chromosome conformation capture (3C) and targets chromatin contacts on a genomic scale. This method has also been used frequently in scaffolding nucleotide sequences obtained by de novo genome sequencing and assembly, in which the number of resultant sequences rarely...
Autores principales: | Kadota, Mitsutaka, Nishimura, Osamu, Miura, Hisashi, Tanaka, Kaori, Hiratani, Ichiro, Kuraku, Shigehiro |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952475/ https://www.ncbi.nlm.nih.gov/pubmed/31919520 http://dx.doi.org/10.1093/gigascience/giz158 |
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