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Functional validity, role, and implications of heavy alcohol consumption genetic loci
High alcohol consumption is a risk factor for morbidity and mortality, yet few genetic loci have been robustly associated with alcohol intake. Here, we use U.K. Biobank (n = 125,249) and GERA (n = 47,967) datasets to determine genetic factors associated with extreme population-level alcohol consumpt...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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American Association for the Advancement of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962045/ https://www.ncbi.nlm.nih.gov/pubmed/31998841 http://dx.doi.org/10.1126/sciadv.aay5034 |
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author | Thompson, Andrew Cook, James Choquet, Hélène Jorgenson, Eric Yin, Jie Kinnunen, Tarja Barclay, Jeff Morris, Andrew P. Pirmohamed, Munir |
author_facet | Thompson, Andrew Cook, James Choquet, Hélène Jorgenson, Eric Yin, Jie Kinnunen, Tarja Barclay, Jeff Morris, Andrew P. Pirmohamed, Munir |
author_sort | Thompson, Andrew |
collection | PubMed |
description | High alcohol consumption is a risk factor for morbidity and mortality, yet few genetic loci have been robustly associated with alcohol intake. Here, we use U.K. Biobank (n = 125,249) and GERA (n = 47,967) datasets to determine genetic factors associated with extreme population-level alcohol consumption and examine the functional validity of outcomes using model organisms and in silico techniques. We identified six loci attaining genome-wide significant association with alcohol consumption after meta-analysis and meeting our criteria for replication: ADH1B (lead SNP: rs1229984), KLB (rs13130794), BTF3P13 (rs144198753), GCKR (rs1260326), SLC39A8 (rs13107325), and DRD2 (rs11214609). A conserved role in phenotypic responses to alcohol was observed for all genetic targets available for investigation (ADH1B, GCKR, SLC39A8, and KLB) in Caenorhabditis elegans. Evidence of causal links to lung cancer, and shared genetic architecture with gout and hypertension was also found. These findings offer insight into genes, pathways, and relationships for disease risk associated with high alcohol consumption. |
format | Online Article Text |
id | pubmed-6962045 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Association for the Advancement of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-69620452020-01-29 Functional validity, role, and implications of heavy alcohol consumption genetic loci Thompson, Andrew Cook, James Choquet, Hélène Jorgenson, Eric Yin, Jie Kinnunen, Tarja Barclay, Jeff Morris, Andrew P. Pirmohamed, Munir Sci Adv Research Articles High alcohol consumption is a risk factor for morbidity and mortality, yet few genetic loci have been robustly associated with alcohol intake. Here, we use U.K. Biobank (n = 125,249) and GERA (n = 47,967) datasets to determine genetic factors associated with extreme population-level alcohol consumption and examine the functional validity of outcomes using model organisms and in silico techniques. We identified six loci attaining genome-wide significant association with alcohol consumption after meta-analysis and meeting our criteria for replication: ADH1B (lead SNP: rs1229984), KLB (rs13130794), BTF3P13 (rs144198753), GCKR (rs1260326), SLC39A8 (rs13107325), and DRD2 (rs11214609). A conserved role in phenotypic responses to alcohol was observed for all genetic targets available for investigation (ADH1B, GCKR, SLC39A8, and KLB) in Caenorhabditis elegans. Evidence of causal links to lung cancer, and shared genetic architecture with gout and hypertension was also found. These findings offer insight into genes, pathways, and relationships for disease risk associated with high alcohol consumption. American Association for the Advancement of Science 2020-01-15 /pmc/articles/PMC6962045/ /pubmed/31998841 http://dx.doi.org/10.1126/sciadv.aay5034 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Thompson, Andrew Cook, James Choquet, Hélène Jorgenson, Eric Yin, Jie Kinnunen, Tarja Barclay, Jeff Morris, Andrew P. Pirmohamed, Munir Functional validity, role, and implications of heavy alcohol consumption genetic loci |
title | Functional validity, role, and implications of heavy alcohol consumption genetic loci |
title_full | Functional validity, role, and implications of heavy alcohol consumption genetic loci |
title_fullStr | Functional validity, role, and implications of heavy alcohol consumption genetic loci |
title_full_unstemmed | Functional validity, role, and implications of heavy alcohol consumption genetic loci |
title_short | Functional validity, role, and implications of heavy alcohol consumption genetic loci |
title_sort | functional validity, role, and implications of heavy alcohol consumption genetic loci |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962045/ https://www.ncbi.nlm.nih.gov/pubmed/31998841 http://dx.doi.org/10.1126/sciadv.aay5034 |
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