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Functional validity, role, and implications of heavy alcohol consumption genetic loci

High alcohol consumption is a risk factor for morbidity and mortality, yet few genetic loci have been robustly associated with alcohol intake. Here, we use U.K. Biobank (n = 125,249) and GERA (n = 47,967) datasets to determine genetic factors associated with extreme population-level alcohol consumpt...

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Autores principales: Thompson, Andrew, Cook, James, Choquet, Hélène, Jorgenson, Eric, Yin, Jie, Kinnunen, Tarja, Barclay, Jeff, Morris, Andrew P., Pirmohamed, Munir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962045/
https://www.ncbi.nlm.nih.gov/pubmed/31998841
http://dx.doi.org/10.1126/sciadv.aay5034
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author Thompson, Andrew
Cook, James
Choquet, Hélène
Jorgenson, Eric
Yin, Jie
Kinnunen, Tarja
Barclay, Jeff
Morris, Andrew P.
Pirmohamed, Munir
author_facet Thompson, Andrew
Cook, James
Choquet, Hélène
Jorgenson, Eric
Yin, Jie
Kinnunen, Tarja
Barclay, Jeff
Morris, Andrew P.
Pirmohamed, Munir
author_sort Thompson, Andrew
collection PubMed
description High alcohol consumption is a risk factor for morbidity and mortality, yet few genetic loci have been robustly associated with alcohol intake. Here, we use U.K. Biobank (n = 125,249) and GERA (n = 47,967) datasets to determine genetic factors associated with extreme population-level alcohol consumption and examine the functional validity of outcomes using model organisms and in silico techniques. We identified six loci attaining genome-wide significant association with alcohol consumption after meta-analysis and meeting our criteria for replication: ADH1B (lead SNP: rs1229984), KLB (rs13130794), BTF3P13 (rs144198753), GCKR (rs1260326), SLC39A8 (rs13107325), and DRD2 (rs11214609). A conserved role in phenotypic responses to alcohol was observed for all genetic targets available for investigation (ADH1B, GCKR, SLC39A8, and KLB) in Caenorhabditis elegans. Evidence of causal links to lung cancer, and shared genetic architecture with gout and hypertension was also found. These findings offer insight into genes, pathways, and relationships for disease risk associated with high alcohol consumption.
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spelling pubmed-69620452020-01-29 Functional validity, role, and implications of heavy alcohol consumption genetic loci Thompson, Andrew Cook, James Choquet, Hélène Jorgenson, Eric Yin, Jie Kinnunen, Tarja Barclay, Jeff Morris, Andrew P. Pirmohamed, Munir Sci Adv Research Articles High alcohol consumption is a risk factor for morbidity and mortality, yet few genetic loci have been robustly associated with alcohol intake. Here, we use U.K. Biobank (n = 125,249) and GERA (n = 47,967) datasets to determine genetic factors associated with extreme population-level alcohol consumption and examine the functional validity of outcomes using model organisms and in silico techniques. We identified six loci attaining genome-wide significant association with alcohol consumption after meta-analysis and meeting our criteria for replication: ADH1B (lead SNP: rs1229984), KLB (rs13130794), BTF3P13 (rs144198753), GCKR (rs1260326), SLC39A8 (rs13107325), and DRD2 (rs11214609). A conserved role in phenotypic responses to alcohol was observed for all genetic targets available for investigation (ADH1B, GCKR, SLC39A8, and KLB) in Caenorhabditis elegans. Evidence of causal links to lung cancer, and shared genetic architecture with gout and hypertension was also found. These findings offer insight into genes, pathways, and relationships for disease risk associated with high alcohol consumption. American Association for the Advancement of Science 2020-01-15 /pmc/articles/PMC6962045/ /pubmed/31998841 http://dx.doi.org/10.1126/sciadv.aay5034 Text en Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Thompson, Andrew
Cook, James
Choquet, Hélène
Jorgenson, Eric
Yin, Jie
Kinnunen, Tarja
Barclay, Jeff
Morris, Andrew P.
Pirmohamed, Munir
Functional validity, role, and implications of heavy alcohol consumption genetic loci
title Functional validity, role, and implications of heavy alcohol consumption genetic loci
title_full Functional validity, role, and implications of heavy alcohol consumption genetic loci
title_fullStr Functional validity, role, and implications of heavy alcohol consumption genetic loci
title_full_unstemmed Functional validity, role, and implications of heavy alcohol consumption genetic loci
title_short Functional validity, role, and implications of heavy alcohol consumption genetic loci
title_sort functional validity, role, and implications of heavy alcohol consumption genetic loci
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962045/
https://www.ncbi.nlm.nih.gov/pubmed/31998841
http://dx.doi.org/10.1126/sciadv.aay5034
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