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On the use of algebraic topology concepts to check the consistency of genome assembly
This paper presents a preliminary work consisting of two contributions. The first one is the design of a very efficient algorithm based on an “Overlap-Layout-Consensus” (OLC) graph to assemble the long reads provided by 3rd generation technologies. The second concerns the analysis of this graph usin...
Autor principal: | Gibrat, Jean-François |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Biophysical Society of Japan (BSJ)
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6975893/ https://www.ncbi.nlm.nih.gov/pubmed/31984196 http://dx.doi.org/10.2142/biophysico.16.0_444 |
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