How to study runs of homozygosity using PLINK? A guide for analyzing medium density SNP data in livestock and pet species

BACKGROUND: PLINK is probably the most used program for analyzing SNP genotypes and runs of homozygosity (ROH), both in human and in animal populations. The last decade, ROH analyses have become the state-of-the-art method for inbreeding assessment. In PLINK, the --homozyg function is used to perfor...

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Detalles Bibliográficos
Autores principales: Meyermans, R., Gorssen, W., Buys, N., Janssens, S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6990544/
https://www.ncbi.nlm.nih.gov/pubmed/31996125
http://dx.doi.org/10.1186/s12864-020-6463-x

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6990544/
https://www.ncbi.nlm.nih.gov/pubmed/31996125
http://dx.doi.org/10.1186/s12864-020-6463-x

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