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Genomic prediction of alcohol-related morbidity and mortality

While polygenic risk scores (PRS) have been shown to predict many diseases and risk factors, the potential of genomic prediction in harm caused by alcohol use has not yet been extensively studied. Here, we built a novel polygenic risk score of 1.1 million variants for alcohol consumption and studied...

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Autores principales: Kiiskinen, Tuomo, Mars, Nina J., Palviainen, Teemu, Koskela, Jukka, Rämö, Joel T., Ripatti, Pietari, Ruotsalainen, Sanni, Palotie, Aarno, Madden, Pamela A. F., Rose, Richard J., Kaprio, Jaakko, Salomaa, Veikko, Mäkelä, Pia, Havulinna, Aki S., Ripatti, Samuli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7026428/
https://www.ncbi.nlm.nih.gov/pubmed/32066667
http://dx.doi.org/10.1038/s41398-019-0676-2
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author Kiiskinen, Tuomo
Mars, Nina J.
Palviainen, Teemu
Koskela, Jukka
Rämö, Joel T.
Ripatti, Pietari
Ruotsalainen, Sanni
Palotie, Aarno
Madden, Pamela A. F.
Rose, Richard J.
Kaprio, Jaakko
Salomaa, Veikko
Mäkelä, Pia
Havulinna, Aki S.
Ripatti, Samuli
author_facet Kiiskinen, Tuomo
Mars, Nina J.
Palviainen, Teemu
Koskela, Jukka
Rämö, Joel T.
Ripatti, Pietari
Ruotsalainen, Sanni
Palotie, Aarno
Madden, Pamela A. F.
Rose, Richard J.
Kaprio, Jaakko
Salomaa, Veikko
Mäkelä, Pia
Havulinna, Aki S.
Ripatti, Samuli
author_sort Kiiskinen, Tuomo
collection PubMed
description While polygenic risk scores (PRS) have been shown to predict many diseases and risk factors, the potential of genomic prediction in harm caused by alcohol use has not yet been extensively studied. Here, we built a novel polygenic risk score of 1.1 million variants for alcohol consumption and studied its predictive capacity in 96,499 participants from the FinnGen study and 39,695 participants from prospective cohorts with detailed baseline data and up to 25 years of follow-up time. A 1 SD increase in the PRS was associated with 11.2 g (=0.93 drinks) higher weekly alcohol consumption (CI = 9.85–12.58 g, p = 2.3 × 10(–58)). The PRS was associated with alcohol-related morbidity (4785 incident events) and the risk estimate between the highest and lowest quintiles of the PRS was 1.83 (95% CI = 1.66–2.01, p = 1.6 × 10(–36)). When adjusted for self-reported alcohol consumption, education, marital status, and gamma-glutamyl transferase blood levels in 28,639 participants with comprehensive baseline data from prospective cohorts, the risk estimate between the highest and lowest quintiles of the PRS was 1.58 (CI = 1.26–1.99, p = 8.2 × 10(–5)). The PRS was also associated with all-cause mortality with a risk estimate of 1.33 between the highest and lowest quintiles (CI = 1.20–1.47, p = 4.5 × 10(–8)) in the adjusted model. In conclusion, the PRS for alcohol consumption independently associates for both alcohol-related morbidity and all-cause mortality. Together, these findings underline the importance of heritable factors in alcohol-related health burden while highlighting how measured genetic risk for an important behavioral risk factor can be used to predict related health outcomes.
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spelling pubmed-70264282020-03-03 Genomic prediction of alcohol-related morbidity and mortality Kiiskinen, Tuomo Mars, Nina J. Palviainen, Teemu Koskela, Jukka Rämö, Joel T. Ripatti, Pietari Ruotsalainen, Sanni Palotie, Aarno Madden, Pamela A. F. Rose, Richard J. Kaprio, Jaakko Salomaa, Veikko Mäkelä, Pia Havulinna, Aki S. Ripatti, Samuli Transl Psychiatry Article While polygenic risk scores (PRS) have been shown to predict many diseases and risk factors, the potential of genomic prediction in harm caused by alcohol use has not yet been extensively studied. Here, we built a novel polygenic risk score of 1.1 million variants for alcohol consumption and studied its predictive capacity in 96,499 participants from the FinnGen study and 39,695 participants from prospective cohorts with detailed baseline data and up to 25 years of follow-up time. A 1 SD increase in the PRS was associated with 11.2 g (=0.93 drinks) higher weekly alcohol consumption (CI = 9.85–12.58 g, p = 2.3 × 10(–58)). The PRS was associated with alcohol-related morbidity (4785 incident events) and the risk estimate between the highest and lowest quintiles of the PRS was 1.83 (95% CI = 1.66–2.01, p = 1.6 × 10(–36)). When adjusted for self-reported alcohol consumption, education, marital status, and gamma-glutamyl transferase blood levels in 28,639 participants with comprehensive baseline data from prospective cohorts, the risk estimate between the highest and lowest quintiles of the PRS was 1.58 (CI = 1.26–1.99, p = 8.2 × 10(–5)). The PRS was also associated with all-cause mortality with a risk estimate of 1.33 between the highest and lowest quintiles (CI = 1.20–1.47, p = 4.5 × 10(–8)) in the adjusted model. In conclusion, the PRS for alcohol consumption independently associates for both alcohol-related morbidity and all-cause mortality. Together, these findings underline the importance of heritable factors in alcohol-related health burden while highlighting how measured genetic risk for an important behavioral risk factor can be used to predict related health outcomes. Nature Publishing Group UK 2020-01-21 /pmc/articles/PMC7026428/ /pubmed/32066667 http://dx.doi.org/10.1038/s41398-019-0676-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kiiskinen, Tuomo
Mars, Nina J.
Palviainen, Teemu
Koskela, Jukka
Rämö, Joel T.
Ripatti, Pietari
Ruotsalainen, Sanni
Palotie, Aarno
Madden, Pamela A. F.
Rose, Richard J.
Kaprio, Jaakko
Salomaa, Veikko
Mäkelä, Pia
Havulinna, Aki S.
Ripatti, Samuli
Genomic prediction of alcohol-related morbidity and mortality
title Genomic prediction of alcohol-related morbidity and mortality
title_full Genomic prediction of alcohol-related morbidity and mortality
title_fullStr Genomic prediction of alcohol-related morbidity and mortality
title_full_unstemmed Genomic prediction of alcohol-related morbidity and mortality
title_short Genomic prediction of alcohol-related morbidity and mortality
title_sort genomic prediction of alcohol-related morbidity and mortality
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7026428/
https://www.ncbi.nlm.nih.gov/pubmed/32066667
http://dx.doi.org/10.1038/s41398-019-0676-2
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