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Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM

The accuracy and predictability of mixture models in NONMEM® may change depending on the relative size of inter-individual differences and the size of the differences in the parameters between subpopulations. This study explored the accuracy of mixture models when dealing with missing a categorical...

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Autores principales: Yoon, SeokKyu, Lim, Hyeong-Seok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society for Clinical Pharmacology and Therapeutics 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7032962/
https://www.ncbi.nlm.nih.gov/pubmed/32095482
http://dx.doi.org/10.12793/tcp.2019.27.4.141
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author Yoon, SeokKyu
Lim, Hyeong-Seok
author_facet Yoon, SeokKyu
Lim, Hyeong-Seok
author_sort Yoon, SeokKyu
collection PubMed
description The accuracy and predictability of mixture models in NONMEM® may change depending on the relative size of inter-individual differences and the size of the differences in the parameters between subpopulations. This study explored the accuracy of mixture models when dealing with missing a categorical covariate under various situations that may occur in reality. We generated simulation data under various scenarios where genotypes representing extensive metabolizers (EM) and poor metabolizers (PM) of drug-metabolizing enzymes affect the clearance of a drug by different degrees, and the inter-individual variations in clearance are different for each scenario. From each simulated datum, a specific proportion of the covariate (genotype information) was randomly removed. Based on these simulation data, the proportion of each individual subpopulation and the clearance were estimated using a mixture model. Overall, the clearance estimate was more accurate when the difference in clearance between subpopulations was large, and the inter-individual variations were small. In some scenarios that showed higher ETA or epsilon shrinkage, the clearance estimates were significantly biased. The mixture model made better predictions for individuals in the EM subpopulation than for individuals in the PM subpopulation. However, the estimated values were not significantly affected by the tested ratio, if the sample size was secured to some extent. The current simulation study suggests that when the coefficient of variation of inter-individual variations of clearance exceeds 40%, the mixture model should be used carefully, and it should be taken into account that shrinkage can bias the results.
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spelling pubmed-70329622020-02-24 Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM Yoon, SeokKyu Lim, Hyeong-Seok Transl Clin Pharmacol Original Article The accuracy and predictability of mixture models in NONMEM® may change depending on the relative size of inter-individual differences and the size of the differences in the parameters between subpopulations. This study explored the accuracy of mixture models when dealing with missing a categorical covariate under various situations that may occur in reality. We generated simulation data under various scenarios where genotypes representing extensive metabolizers (EM) and poor metabolizers (PM) of drug-metabolizing enzymes affect the clearance of a drug by different degrees, and the inter-individual variations in clearance are different for each scenario. From each simulated datum, a specific proportion of the covariate (genotype information) was randomly removed. Based on these simulation data, the proportion of each individual subpopulation and the clearance were estimated using a mixture model. Overall, the clearance estimate was more accurate when the difference in clearance between subpopulations was large, and the inter-individual variations were small. In some scenarios that showed higher ETA or epsilon shrinkage, the clearance estimates were significantly biased. The mixture model made better predictions for individuals in the EM subpopulation than for individuals in the PM subpopulation. However, the estimated values were not significantly affected by the tested ratio, if the sample size was secured to some extent. The current simulation study suggests that when the coefficient of variation of inter-individual variations of clearance exceeds 40%, the mixture model should be used carefully, and it should be taken into account that shrinkage can bias the results. Korean Society for Clinical Pharmacology and Therapeutics 2019-12 2019-12-31 /pmc/articles/PMC7032962/ /pubmed/32095482 http://dx.doi.org/10.12793/tcp.2019.27.4.141 Text en Copyright © 2019 Translational and Clinical Pharmacology http://creativecommons.org/licenses/by-nc/3.0/ It is identical to the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/).
spellingShingle Original Article
Yoon, SeokKyu
Lim, Hyeong-Seok
Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM
title Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM
title_full Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM
title_fullStr Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM
title_full_unstemmed Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM
title_short Performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in NONMEM
title_sort performance of a mixture model by the degree of a missing categorical covariate when estimating clearance in nonmem
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7032962/
https://www.ncbi.nlm.nih.gov/pubmed/32095482
http://dx.doi.org/10.12793/tcp.2019.27.4.141
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