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SHARP: hyperfast and accurate processing of single-cell RNA-seq data via ensemble random projection

To process large-scale single-cell RNA-sequencing (scRNA-seq) data effectively without excessive distortion during dimension reduction, we present SHARP, an ensemble random projection-based algorithm that is scalable to clustering 10 million cells. Comprehensive benchmarking tests on 17 public scRNA...

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Detalles Bibliográficos
Autores principales: Wan, Shibiao, Kim, Junil, Won, Kyoung Jae
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7050522/
https://www.ncbi.nlm.nih.gov/pubmed/31992615
http://dx.doi.org/10.1101/gr.254557.119