PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S ribosomal RNA, ITS, and COI marker genes

BACKGROUND: Environmental DNA and metabarcoding allow the identification of a mixture of species and launch a new era in bio- and eco-assessment. Many steps are required to obtain taxonomically assigned matrices from raw data. For most of these, a plethora of tools are available; each tool's ex...

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Detalles Bibliográficos
Autores principales: Zafeiropoulos, Haris, Viet, Ha Quoc, Vasileiadou, Katerina, Potirakis, Antonis, Arvanitidis, Christos, Topalis, Pantelis, Pavloudi, Christina, Pafilis, Evangelos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7066391/
https://www.ncbi.nlm.nih.gov/pubmed/32161947
http://dx.doi.org/10.1093/gigascience/giaa022

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7066391/
https://www.ncbi.nlm.nih.gov/pubmed/32161947
http://dx.doi.org/10.1093/gigascience/giaa022

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