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Transformer-CNN: Swiss knife for QSAR modeling and interpretation

We present SMILES-embeddings derived from the internal encoder state of a Transformer [1] model trained to canonize SMILES as a Seq2Seq problem. Using a CharNN [2] architecture upon the embeddings results in higher quality interpretable QSAR/QSPR models on diverse benchmark datasets including regres...

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Detalles Bibliográficos
Autores principales: Karpov, Pavel, Godin, Guillaume, Tetko, Igor V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7079452/
https://www.ncbi.nlm.nih.gov/pubmed/33431004
http://dx.doi.org/10.1186/s13321-020-00423-w