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Large scale automated phylogenomic analysis of bacterial isolates and the Evergreen Online platform

Public health authorities whole-genome sequence thousands of isolates each month for microbial diagnostics and surveillance of pathogenic bacteria. The computational methods have not kept up with the deluge of data and the need for real-time results. We have therefore created a bioinformatics pipeli...

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Detalles Bibliográficos
Autores principales: Szarvas, Judit, Ahrenfeldt, Johanne, Cisneros, Jose Luis Bellod, Thomsen, Martin Christen Frølund, Aarestrup, Frank M., Lund, Ole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7083913/
https://www.ncbi.nlm.nih.gov/pubmed/32198478
http://dx.doi.org/10.1038/s42003-020-0869-5