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A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism

Two primers with the length of 22 bases each and 400 bases apart on the spike protein gene of avian infectious bronchitis virus (IBV) were prepared. Using these primers, the genome RNA from twelve strains of the various serotypes were reverse-transcribed to cDNA and amplified by polymerase chain rea...

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Detalles Bibliográficos
Autores principales: Lin, Z., Kato, A., Kudou, Y., Ueda, S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer-Verlag 1991
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7086981/
https://www.ncbi.nlm.nih.gov/pubmed/1672064
http://dx.doi.org/10.1007/BF01319228
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author Lin, Z.
Kato, A.
Kudou, Y.
Ueda, S.
author_facet Lin, Z.
Kato, A.
Kudou, Y.
Ueda, S.
author_sort Lin, Z.
collection PubMed
description Two primers with the length of 22 bases each and 400 bases apart on the spike protein gene of avian infectious bronchitis virus (IBV) were prepared. Using these primers, the genome RNA from twelve strains of the various serotypes were reverse-transcribed to cDNA and amplified by polymerase chain reaction (PCR). With all strains, 400 base DNA was amplified, indicating that there were no apparent insertions or deletions in this region. However, the amplified DNA showed different cleavage patterns by the restriction enzymes. These 12 strains were classified into 5 groups. The strain typing based on a comparison of the cleavage patterns was consistent with the previous serological typing. This study thus provides a simple and rapid method for typing of IBV.
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spelling pubmed-70869812020-03-23 A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism Lin, Z. Kato, A. Kudou, Y. Ueda, S. Arch Virol Original Papers Two primers with the length of 22 bases each and 400 bases apart on the spike protein gene of avian infectious bronchitis virus (IBV) were prepared. Using these primers, the genome RNA from twelve strains of the various serotypes were reverse-transcribed to cDNA and amplified by polymerase chain reaction (PCR). With all strains, 400 base DNA was amplified, indicating that there were no apparent insertions or deletions in this region. However, the amplified DNA showed different cleavage patterns by the restriction enzymes. These 12 strains were classified into 5 groups. The strain typing based on a comparison of the cleavage patterns was consistent with the previous serological typing. This study thus provides a simple and rapid method for typing of IBV. Springer-Verlag 1991 /pmc/articles/PMC7086981/ /pubmed/1672064 http://dx.doi.org/10.1007/BF01319228 Text en © Springer-Verlag 1991 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Papers
Lin, Z.
Kato, A.
Kudou, Y.
Ueda, S.
A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
title A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
title_full A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
title_fullStr A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
title_full_unstemmed A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
title_short A new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
title_sort new typing method for the avian infectious bronchitis virus using polymerase chain reaction and restriction enzyme fragment length polymorphism
topic Original Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7086981/
https://www.ncbi.nlm.nih.gov/pubmed/1672064
http://dx.doi.org/10.1007/BF01319228
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