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Can we use it? On the utility of de novo and reference-based assembly of Nanopore data for plant plastome sequencing
The chloroplast genome harbors plenty of valuable information for phylogenetic research. Illumina short-read data is generally used for de novo assembly of whole plastomes. PacBio or Oxford Nanopore long reads are additionally employed in hybrid approaches to enable assembly across the highly simila...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7092973/ https://www.ncbi.nlm.nih.gov/pubmed/32208422 http://dx.doi.org/10.1371/journal.pone.0226234 |