Binning unassembled short reads based on k-mer abundance covariance using sparse coding

BACKGROUND: Sequence-binning techniques enable the recovery of an increasing number of genomes from complex microbial metagenomes and typically require prior metagenome assembly, incurring the computational cost and drawbacks of the latter, e.g., biases against low-abundance genomes and inability to...

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Detalles Bibliográficos
Autores principales: Kyrgyzov, Olexiy, Prost, Vincent, Gazut, Stéphane, Farcy, Bruno, Brüls, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7099633/
https://www.ncbi.nlm.nih.gov/pubmed/32219339
http://dx.doi.org/10.1093/gigascience/giaa028

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7099633/
https://www.ncbi.nlm.nih.gov/pubmed/32219339
http://dx.doi.org/10.1093/gigascience/giaa028

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