Phylonium: fast estimation of evolutionary distances from large samples of similar genomes

MOTIVATION: Tracking disease outbreaks by whole-genome sequencing leads to the collection of large samples of closely related sequences. Five years ago, we published a method to accurately compute all pairwise distances for such samples by indexing each sequence. Since indexing is slow, we now ask w...

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Detalles Bibliográficos
Autores principales: Klötzl, Fabian, Haubold, Bernhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7141870/
https://www.ncbi.nlm.nih.gov/pubmed/31790149
http://dx.doi.org/10.1093/bioinformatics/btz903

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7141870/
https://www.ncbi.nlm.nih.gov/pubmed/31790149
http://dx.doi.org/10.1093/bioinformatics/btz903

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