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Consistent RNA sequencing contamination in GTEx and other data sets
A challenge of next generation sequencing is read contamination. We use Genotype-Tissue Expression (GTEx) datasets and technical metadata along with RNA-seq datasets from other studies to understand factors that contribute to contamination. Here we report, of 48 analyzed tissues in GTEx, 26 have var...
Autores principales: | Nieuwenhuis, Tim O., Yang, Stephanie Y., Verma, Rohan X., Pillalamarri, Vamsee, Arking, Dan E., Rosenberg, Avi Z., McCall, Matthew N., Halushka, Marc K. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7176728/ https://www.ncbi.nlm.nih.gov/pubmed/32321923 http://dx.doi.org/10.1038/s41467-020-15821-9 |
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