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PaSiT: a novel approach based on short-oligonucleotide frequencies for efficient bacterial identification and typing
MOTIVATION: One of the most widespread methods used in taxonomy studies to distinguish between strains or taxa is the calculation of average nucleotide identity. It requires a computationally expensive alignment step and is therefore not suitable for large-scale comparisons. Short oligonucleotide-ba...
| Autores principales: | , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2020
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7178395/ https://www.ncbi.nlm.nih.gov/pubmed/31899493 http://dx.doi.org/10.1093/bioinformatics/btz964 |