Cargando…

Locally acting transcription factors regulate p53-dependent cis-regulatory element activity

The master tumor suppressor p53 controls transcription of a wide-ranging gene network involved in apoptosis, cell cycle arrest, DNA damage repair, and senescence. Recent studies revealed pervasive binding of p53 to cis-regulatory elements (CREs), which are non-coding segments of DNA that spatially a...

Descripción completa

Detalles Bibliográficos
Autores principales:	Catizone, Allison N, Uzunbas, Gizem Karsli, Celadova, Petra, Kuang, Sylvia, Bose, Daniel, Sammons, Morgan A
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2020
Materias:	Gene regulation, Chromatin and Epigenetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7192610/ https://www.ncbi.nlm.nih.gov/pubmed/32133495 http://dx.doi.org/10.1093/nar/gkaa147

Ejemplares similares

Global identification of the genetic networks and cis-regulatory elements of the cold response in zebrafish
por: Hu, Peng, et al.
Publicado: (2015)

A novel cis-acting element from the 3′UTR of DNA damage-binding protein 2 mRNA links transcriptional and post-transcriptional regulation of gene expression
por: Melanson, Brian D., et al.
Publicado: (2013)

Genetic context effects can override canonical cis regulatory elements in Escherichia coli
por: Scholz, Scott A, et al.
Publicado: (2022)

Correlated changes between regulatory cis elements and condition-specific expression in paralogous gene families
por: Singh, Larry N., et al.
Publicado: (2010)

RAR/RXR binding dynamics distinguish pluripotency from differentiation associated cis-regulatory elements
por: Chatagnon, Amandine, et al.
Publicado: (2015)

Differential contribution of cis-regulatory elements to higher order chromatin structure and expression of the CFTR locus
por: Yang, Rui, et al.
Publicado: (2016)

Looping of upstream cis-regulatory elements is required for CFTR expression in human airway epithelial cells
por: NandyMazumdar, Monali, et al.
Publicado: (2020)

G-quadruplexes as novel cis-elements controlling transcription during embryonic development
por: David, Aldana P., et al.
Publicado: (2016)

Retrograde BMP signaling activates neuronal gene expression through widespread deployment of a conserved BMP-responsive cis-regulatory activation element
por: Vuilleumier, Robin, et al.
Publicado: (2019)

Optimisation of TP53 reporters by systematic dissection of synthetic TP53 response elements
por: Trauernicht, Max, et al.
Publicado: (2023)

Creating and validating cis-regulatory maps of tissue-specific gene expression regulation
por: O'Connor, Timothy R., et al.
Publicado: (2014)

Long non-coding RNAs transcribed by ERV-9 LTR retrotransposon act in cis to modulate long-range LTR enhancer function
por: Hu, Tianxiang, et al.
Publicado: (2017)

Epstein–Barr virus transcription factor Zta acts through distal regulatory elements to directly control cellular gene expression
por: Ramasubramanyan, Sharada, et al.
Publicado: (2015)

Formation of stress-specific p53 binding patterns is influenced by chromatin but not by modulation of p53 binding affinity to response elements(†)
por: Millau, Jean-François, et al.
Publicado: (2011)

Dichotomous cis-regulatory motifs mediate the maturation of the neuromuscular junction by retrograde BMP signaling
por: Vuilleumier, Robin, et al.
Publicado: (2022)

Two p53 tetramers bind one consensus DNA response element
por: Kearns, Sinéad, et al.
Publicado: (2016)

A cis-element with mixed G-quadruplex structure of NPGPx promoter is essential for nucleolin-mediated transactivation on non-targeting siRNA stress
por: Wei, Pei-Chi, et al.
Publicado: (2013)

Cryptic transcripts from a ubiquitous plasmid origin of replication confound tests for cis-regulatory function
por: Lemp, Nathan A., et al.
Publicado: (2012)

MyoD regulates p57(kip2) expression by interacting with a distant cis-element and modifying a higher order chromatin structure
por: Busanello, Anna, et al.
Publicado: (2012)

RBPJ binds to consensus and methylated cis elements within phased nucleosomes and controls gene expression in human aortic smooth muscle cells in cooperation with SRF
por: Rozenberg, Julian M, et al.
Publicado: (2018)

The Drosophila MLR COMPASS complex is essential for programming cis-regulatory information and maintaining epigenetic memory during development
por: Zraly, Claudia B, et al.
Publicado: (2020)

MyoD reprogramming requires Six1 and Six4 homeoproteins: genome-wide cis-regulatory module analysis
por: Santolini, Marc, et al.
Publicado: (2016)

Rotational positioning of nucleosomes facilitates selective binding of p53 to response elements associated with cell cycle arrest
por: Cui, Feng, et al.
Publicado: (2014)

Nucleosome occupancy reveals regulatory elements of the CFTR promoter
por: Ott, Christopher J., et al.
Publicado: (2012)

Cis-regulation of microRNA expression by scaffold/matrix-attachment regions
por: Chavali, Pavithra Lakshminarasimhan, et al.
Publicado: (2011)

A network of cis and trans interactions is required for ParB spreading
por: Song, Dan, et al.
Publicado: (2017)

Characterization of new regulatory elements within the Drosophila bithorax complex
por: Pérez-Lluch, Sílvia, et al.
Publicado: (2008)

Discrimination between thermodynamic models of cis-regulation using transcription factor occupancy data
por: Zeigler, Robert D., et al.
Publicado: (2014)

Integrative analysis of epigenetics data identifies gene-specific regulatory elements
por: Schmidt, Florian, et al.
Publicado: (2021)

Regulatory elements can be essential for maintaining broad chromatin organization and cell viability
por: Liu, Ying, et al.
Publicado: (2022)

The ‘Alu-ome’ shapes the epigenetic environment of regulatory elements controlling cellular defense
por: Costallat, Mickael, et al.
Publicado: (2022)

Dissecting relative contributions of cis- and trans-determinants to nucleosome distribution by comparing Tetrahymena macronuclear and micronuclear chromatin
por: Xiong, Jie, et al.
Publicado: (2016)

Activation of the oncogenic transcription factor B-Myb via multisite phosphorylation and prolyl cis/trans isomerization
por: Werwein, Eugen, et al.
Publicado: (2019)

Orientation-dependent interaction between Drosophila insulators is a property of this class of regulatory elements
por: Kyrchanova, Olga, et al.
Publicado: (2008)

High-throughput identification of long-range regulatory elements and their target promoters in the human genome
por: Hwang, Yih-Chii, et al.
Publicado: (2013)

Epigenetic regulatory elements associate with specific histone modifications to prevent silencing of telomeric genes
por: Majocchi, Stefano, et al.
Publicado: (2014)

Gene-specific factors determine mitotic expression and bookmarking via alternate regulatory elements
por: Arampatzi, Panagiota, et al.
Publicado: (2013)

Dynamic changes in cis-regulatory occupancy by Six1 and its cooperative interactions with distinct cofactors drive lineage-specific gene expression programs during progressive differentiation of the auditory sensory epithelium
por: Li, Jun, et al.
Publicado: (2020)

The activity of the HIV-1 IRES is stimulated by oxidative stress and controlled by a negative regulatory element
por: Gendron, Karine, et al.
Publicado: (2011)

Analysis of long-range interactions in primary human cells identifies cooperative CFTR regulatory elements
por: Moisan, Stéphanie, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_sebktm5vr3r1n411vdpfi3dsee