PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals

In this paper we study the problem of clustering bacterial isolates into epidemiologically related groups from next-generation sequencing data. Existing methods for this problem mainly use a single genotyping signal, and either use a distance-based method with a pre-specified number of clusters, or...

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Detalles Bibliográficos
Autores principales: Katebi, Mohsen, Feijao, Pedro, Booth, Julius, Mansouri, Mehrdad, La, Sean, Sweeten, Alex, Miraskarshahi, Reza, Nguyen, Matthew, Wong, Johnathan, Hsiao, William, Chauve, Cedric, Chindelevitch, Leonid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7197062/
http://dx.doi.org/10.1007/978-3-030-42266-0_9

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7197062/
http://dx.doi.org/10.1007/978-3-030-42266-0_9

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