PlasGUN: gene prediction in plasmid metagenomic short reads using deep learning

SUMMARY: We present the first tool of gene prediction, PlasGUN, for plasmid metagenomic short-read data. The tool, developed based on deep learning algorithm of multiple input Convolutional Neural Network, demonstrates much better performance when tested on a benchmark dataset of artificial short re...

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Detalles Bibliográficos
Autores principales: Fang, Zhencheng, Tan, Jie, Wu, Shufang, Li, Mo, Wang, Chunhui, Liu, Yongchu, Zhu, Huaiqiu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7214025/
https://www.ncbi.nlm.nih.gov/pubmed/32091572
http://dx.doi.org/10.1093/bioinformatics/btaa103

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7214025/
https://www.ncbi.nlm.nih.gov/pubmed/32091572
http://dx.doi.org/10.1093/bioinformatics/btaa103

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