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CNN-Peaks: ChIP-Seq peak detection pipeline using convolutional neural networks that imitate human visual inspection

ChIP-seq is one of the core experimental resources available to understand genome-wide epigenetic interactions and identify the functional elements associated with diseases. The analysis of ChIP-seq data is important but poses a difficult computational challenge, due to the presence of irregular noi...

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Detalles Bibliográficos
Autores principales: Oh, Dongpin, Strattan, J. Seth, Hur, Junho K., Bento, José, Urban, Alexander Eckehart, Song, Giltae, Cherry, J. Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7220942/
https://www.ncbi.nlm.nih.gov/pubmed/32404971
http://dx.doi.org/10.1038/s41598-020-64655-4