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Context-aware seeds for read mapping
MOTIVATION: Most modern seed-and-extend NGS read mappers employ a seeding scheme that requires extracting t non-overlapping seeds in each read in order to find all valid mappings under an edit distance threshold of t. As t grows, this seeding scheme forces mappers to use more and shorter seeds, whic...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2020
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7245042/ https://www.ncbi.nlm.nih.gov/pubmed/32489399 http://dx.doi.org/10.1186/s13015-020-00172-3 |