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Exploring dimension-reduced embeddings with Sleepwalk

Dimension-reduction methods, such as t-SNE or UMAP, are widely used when exploring high-dimensional data describing many entities, for example, RNA-seq data for many single cells. However, dimension reduction is commonly prone to introducing artifacts, and we hence need means to see where a dimensio...

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Detalles Bibliográficos
Autores principales: Ovchinnikova, Svetlana, Anders, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7263188/
https://www.ncbi.nlm.nih.gov/pubmed/32430339
http://dx.doi.org/10.1101/gr.251447.119